U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TRAPPC2L trafficking protein particle complex subunit 2L [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697970, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    TRAPPC2L
    Gene description
    trafficking protein particle complex subunit 2L
    See related
    Ensembl:ENSMMUG00000053471
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TRAPPC2L in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (75876287..75882366)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (73694350..73701546)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene adenine phosphoribosyltransferase Neighboring gene galactosamine (N-acetyl)-6-sulfatase Neighboring gene uncharacterized LOC114674394 Neighboring gene PABPN1 like, cytoplasmic Neighboring gene CBFA2/RUNX1 partner transcriptional co-repressor 3 Neighboring gene uncharacterized LOC114674460

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TRAPP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    trafficking protein particle complex subunit 2-like protein
    Names
    trafficking protein particle complex 2 like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001265756.1 → NP_001252685.1  trafficking protein particle complex subunit 2-like protein

      See identical proteins and their annotated locations for NP_001252685.1

      Status: PROVISIONAL

      Source sequence(s)
      JV636212
      UniProtKB/TrEMBL
      G7MI29, I2CX67
      Conserved Domains (1) summary
      cd14854
      Location:3 → 135
      TRAPPC2L; Trafficking protein particle complex subunit 2-like

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      75876287..75882366
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028840419.1 → XP_028696252.1  trafficking protein particle complex subunit 2-like protein isoform X12

      UniProtKB/TrEMBL
      F7DIU0
      Conserved Domains (1) summary
      cd14854
      Location:3 → 126
      TRAPPC2L; Trafficking protein particle complex subunit 2-like

    2. XM_028840411.1 → XP_028696244.1  trafficking protein particle complex subunit 2-like protein isoform X4

      UniProtKB/TrEMBL
      G7NQ91
      Conserved Domains (1) summary
      cd14854
      Location:3 → 126
      TRAPPC2L; Trafficking protein particle complex subunit 2-like

    3. XM_028840413.1 → XP_028696246.1  trafficking protein particle complex subunit 2-like protein isoform X6

      Conserved Domains (1) summary
      cd14854
      Location:3 → 126
      TRAPPC2L; Trafficking protein particle complex subunit 2-like

    4. XM_028840414.1 → XP_028696247.1  trafficking protein particle complex subunit 2-like protein isoform X7

      Conserved Domains (1) summary
      cd14854
      Location:3 → 126
      TRAPPC2L; Trafficking protein particle complex subunit 2-like

    5. XM_028840415.1 → XP_028696248.1  trafficking protein particle complex subunit 2-like protein isoform X8

      UniProtKB/TrEMBL
      F7DIU0
      Conserved Domains (1) summary
      cd14854
      Location:3 → 124
      TRAPPC2L; Trafficking protein particle complex subunit 2-like

    6. XM_028840417.1 → XP_028696250.1  trafficking protein particle complex subunit 2-like protein isoform X10

      UniProtKB/TrEMBL
      F7DIU0
      Related
      ENSMMUP00000016325.4, ENSMMUT00000017431.4
      Conserved Domains (1) summary
      cd14854
      Location:3 → 124
      TRAPPC2L; Trafficking protein particle complex subunit 2-like

    7. XM_028840418.1 → XP_028696251.1  trafficking protein particle complex subunit 2-like protein isoform X11

      UniProtKB/TrEMBL
      F7DIU0
      Conserved Domains (1) summary
      cd14854
      Location:3 → 124
      TRAPPC2L; Trafficking protein particle complex subunit 2-like

    8. XM_015126780.2 → XP_014982266.1  trafficking protein particle complex subunit 2-like protein isoform X13

      UniProtKB/TrEMBL
      G7MI29
      Conserved Domains (1) summary
      cd14854
      Location:3 → 136
      TRAPPC2L; Trafficking protein particle complex subunit 2-like

    9. XM_028840408.1 → XP_028696241.1  trafficking protein particle complex subunit 2-like protein isoform X1

      Conserved Domains (1) summary
      cd14854
      Location:3 → 124
      TRAPPC2L; Trafficking protein particle complex subunit 2-like

    10. XM_028840409.1 → XP_028696242.1  trafficking protein particle complex subunit 2-like protein isoform X2

      Conserved Domains (1) summary
      cd14854
      Location:3 → 126
      TRAPPC2L; Trafficking protein particle complex subunit 2-like

    11. XM_028840410.1 → XP_028696243.1  trafficking protein particle complex subunit 2-like protein isoform X3

      UniProtKB/TrEMBL
      G7NQ91
      Conserved Domains (1) summary
      cd14854
      Location:3 → 124
      TRAPPC2L; Trafficking protein particle complex subunit 2-like

    12. XM_028840412.1 → XP_028696245.1  trafficking protein particle complex subunit 2-like protein isoform X5

      Conserved Domains (1) summary
      cd14854
      Location:3 → 126
      TRAPPC2L; Trafficking protein particle complex subunit 2-like

    13. XM_028840416.1 → XP_028696249.1  trafficking protein particle complex subunit 2-like protein isoform X9

      UniProtKB/TrEMBL
      F7DIU0
      Conserved Domains (1) summary
      cd14854
      Location:3 → 124
      TRAPPC2L; Trafficking protein particle complex subunit 2-like

    14. XM_028840420.1 → XP_028696253.1  trafficking protein particle complex subunit 2-like protein isoform X14

      Conserved Domains (1) summary
      cl38905
      Location:60 → 125
      longin-like; Longin-like domains
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials