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    PJVK pejvakin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708668, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PJVKprovided by VGNC
    Official Full Name
    pejvakinprovided by VGNC
    Primary source
    VGNC:VGNC:104549
    Locus tag
    EGK_04580
    See related
    Ensembl:ENSMMUG00000054264
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    DFNB59
    Orthologs
    human mouse all
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    Genomic context

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    See PJVK in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (65550794..65592557)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (65534716..65544593)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein like 6 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106992640 Neighboring gene nuclear migration protein nudC pseudogene Neighboring gene protein activator of interferon induced protein kinase EIF2AK2 Neighboring gene FKBP prolyl isomerase 7 Neighboring gene pleckstrin homology domain containing A3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in programmed cell death IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pejvakin
    Names
    deafness, autosomal recessive 59

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      65550794..65592557
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028830887.1 → XP_028686720.1  pejvakin isoform X3

      Conserved Domains (1) summary
      pfam04598
      Location:2 → 192
      Gasdermin; Gasdermin family

    2. XM_028830885.1 → XP_028686718.1  pejvakin isoform X2

      Conserved Domains (1) summary
      pfam04598
      Location:1 → 223
      Gasdermin; Gasdermin family

    3. XM_015110440.2 → XP_014965926.1  pejvakin isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZL82, A0A8J8Y5Z7, G7N8E8
      Related
      ENSMMUP00000066394.1, ENSMMUT00000090343.1
      Conserved Domains (1) summary
      pfam04598
      Location:1 → 237
      Gasdermin; Gasdermin family

    4. XM_028830888.1 → XP_028686721.1  pejvakin isoform X4

      Conserved Domains (1) summary
      pfam04598
      Location:44 → 259
      Gasdermin; Gasdermin family
    Nucleotide Protein
    Heading Accession and Version

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