U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TRMT5 tRNA methyltransferase 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704146, updated on 15-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TRMT5provided by VGNC
    Official Full Name
    tRNA methyltransferase 5provided by VGNC
    Primary source
    VGNC:VGNC:99335
    See related
    Ensembl:ENSMMUG00000013611
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    TRM5
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TRMT5 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (123072636..123082297, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (122960040..122966018, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene SIX homeobox 4 Neighboring gene MNAT1 component of CDK activating kinase Neighboring gene U6 spliceosomal RNA Neighboring gene solute carrier family 38 member 6 Neighboring gene uncharacterized LOC106999453 Neighboring gene transmembrane protein 30B

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Evolutionary and biomedical insights from the rhesus macaque genome. Rhesus Macaque Genome Sequencing and Analysis Consortium, et al. Science, 2007 Apr 13. PMID 17431167
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mitochondrial tRNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tRNA N1-guanine methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tRNA (guanine(37)-N(1))-methyltransferase; tRNA (guanine(37)-N1)-methyltransferase
    Names
    M1G-methyltransferase
    TRM5 tRNA methyltransferase 5 homolog
    tRNA (guanine-N(1)-)-methyltransferase
    tRNA [GM37] methyltransferase
    NP_001248547.1
    XP_028706143.1
    XP_028706144.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261618.1 → NP_001248547.1  tRNA (guanine(37)-N(1))-methyltransferase

      See identical proteins and their annotated locations for NP_001248547.1

      Status: PROVISIONAL

      Source sequence(s)
      JU473748
      UniProtKB/Swiss-Prot
      F7GSQ4
      UniProtKB/TrEMBL
      G7MY83, H9EXS2
      Related
      ENSMMUP00000047637.2, ENSMMUT00000078967.2
      Conserved Domains (1) summary
      COG2520
      Location:97 → 469
      Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      123072636..123082297 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028850310.1 → XP_028706143.1  tRNA (guanine(37)-N1)-methyltransferase isoform X1

      UniProtKB/TrEMBL
      G7MY83
      Conserved Domains (1) summary
      COG2520
      Location:125 → 497
      Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]

    2. XM_028850311.1 → XP_028706144.1  tRNA (guanine(37)-N1)-methyltransferase isoform X2

      UniProtKB/TrEMBL
      G7MY83
      Conserved Domains (1) summary
      COG2520
      Location:124 → 496
      Trm5; tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F7GSQ4.1 GenPept UniProtKB/Swiss-Prot:F7GSQ4

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials