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    LRRC7 leucine rich repeat containing 7 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702347, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LRRC7provided by VGNC
    Official Full Name
    leucine rich repeat containing 7provided by VGNC
    Primary source
    VGNC:VGNC:100002
    See related
    Ensembl:ENSMMUG00000021917
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LRRC7 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (154328042..154881180, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (69684519..69882126)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene ANKRD13C divergent transcript Neighboring gene ankyrin repeat domain 13C Neighboring gene serine and arginine rich splicing factor 11 Neighboring gene leucine rich repeat containing 40 Neighboring gene peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 pseudogene Neighboring gene uncharacterized LOC114678234 Neighboring gene uncharacterized LOC114672100 Neighboring gene ATPase family AAA domain-containing protein 1 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in neurotransmitter receptor transport postsynaptic membrane to endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neurotransmitter receptor transport, endosome to postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic density IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat-containing protein 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      154328042..154881180 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028832529.1 → XP_028688362.1  leucine-rich repeat-containing protein 7 isoform X3

      UniProtKB/TrEMBL
      F6T533
      Conserved Domains (4) summary
      COG4886
      Location:130 → 440
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd00992
      Location:1485 → 1570
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      sd00033
      Location:64 → 85
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:85 → 140
      LRR_8; Leucine rich repeat

    2. XM_028832544.1 → XP_028688377.1  leucine-rich repeat-containing protein 7 isoform X8

      UniProtKB/TrEMBL
      F6T533
      Conserved Domains (4) summary
      COG4886
      Location:97 → 407
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd00992
      Location:1405 → 1490
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      sd00033
      Location:31 → 52
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:52 → 107
      LRR_8; Leucine rich repeat

    3. XM_028832547.1 → XP_028688380.1  leucine-rich repeat-containing protein 7 isoform X9

      UniProtKB/TrEMBL
      F6T533
      Conserved Domains (3) summary
      COG4886
      Location:131 → 441
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:65 → 86
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:86 → 141
      LRR_8; Leucine rich repeat

    4. XM_028832526.1 → XP_028688359.1  leucine-rich repeat-containing protein 7 isoform X2

      UniProtKB/TrEMBL
      F6T533
      Conserved Domains (4) summary
      COG4886
      Location:131 → 441
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd00992
      Location:1486 → 1571
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      sd00033
      Location:65 → 86
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:85 → 141
      LRR_8; Leucine rich repeat

    5. XM_028832540.1 → XP_028688373.1  leucine-rich repeat-containing protein 7 isoform X6

      UniProtKB/TrEMBL
      F6T533
      Conserved Domains (3) summary
      COG4886
      Location:149 → 459
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:83 → 104
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:104 → 159
      LRR_8; Leucine rich repeat

    6. XM_028832541.1 → XP_028688374.1  leucine-rich repeat-containing protein 7 isoform X7

      UniProtKB/TrEMBL
      F6T533
      Conserved Domains (4) summary
      COG4886
      Location:149 → 459
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd00992
      Location:1437 → 1522
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      sd00033
      Location:83 → 104
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:103 → 159
      LRR_8; Leucine rich repeat

    7. XM_028832523.1 → XP_028688356.1  leucine-rich repeat-containing protein 7 isoform X1

      UniProtKB/TrEMBL
      F6T533
      Conserved Domains (4) summary
      COG4886
      Location:149 → 459
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd00992
      Location:1504 → 1589
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      sd00033
      Location:83 → 104
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:104 → 159
      LRR_8; Leucine rich repeat

    8. XM_028832535.1 → XP_028688368.1  leucine-rich repeat-containing protein 7 isoform X4

      UniProtKB/TrEMBL
      F6T533
      Conserved Domains (4) summary
      COG4886
      Location:149 → 459
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd00992
      Location:1457 → 1542
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      sd00033
      Location:83 → 104
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:104 → 159
      LRR_8; Leucine rich repeat

    9. XM_028832538.1 → XP_028688371.1  leucine-rich repeat-containing protein 7 isoform X5

      UniProtKB/TrEMBL
      F6T533
      Related
      ENSMMUP00000028859.4, ENSMMUT00000030836.4
      Conserved Domains (4) summary
      COG4886
      Location:97 → 407
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd00992
      Location:1452 → 1537
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      sd00033
      Location:31 → 52
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:52 → 107
      LRR_8; Leucine rich repeat

    10. XM_028832551.1 → XP_028688384.1  leucine-rich repeat-containing protein 7 isoform X10

      Conserved Domains (2) summary
      COG4886
      Location:81 → 275
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:83 → 104
      LRR_RI; leucine-rich repeat [structural motif]

    11. XM_015142159.2 → XP_014997645.1  leucine-rich repeat-containing protein 7 isoform X13

      Conserved Domains (2) summary
      COG4886
      Location:62 → 217
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:64 → 85
      LRR_RI; leucine-rich repeat [structural motif]

    12. XM_028832560.1 → XP_028688393.1  leucine-rich repeat-containing protein 7 isoform X14

      Conserved Domains (2) summary
      COG4886
      Location:29 → 184
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:31 → 52
      LRR_RI; leucine-rich repeat [structural motif]

    13. XM_028832554.1 → XP_028688387.1  leucine-rich repeat-containing protein 7 isoform X12

      Conserved Domains (2) summary
      COG4886
      Location:63 → 218
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:65 → 86
      LRR_RI; leucine-rich repeat [structural motif]

    14. XM_028832552.1 → XP_028688385.1  leucine-rich repeat-containing protein 7 isoform X11

      Conserved Domains (2) summary
      COG4886
      Location:81 → 236
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:83 → 104
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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