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    CNOT9 CCR4-NOT transcription complex subunit 9 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701978, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CNOT9provided by VGNC
    Official Full Name
    CCR4-NOT transcription complex subunit 9provided by VGNC
    Primary source
    VGNC:VGNC:71165
    Locus tag
    EGK_04796
    See related
    Ensembl:ENSMMUG00000009626
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CNOT9 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (105996442..106027686)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (100686652..100718012)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene CTD small phosphatase 1 Neighboring gene microRNA mir-26b Neighboring gene villin 1 Neighboring gene ubiquitin specific peptidase 37 Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA U3 Neighboring gene phospholipase C delta 4 Neighboring gene zinc finger protein 142 Neighboring gene BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mRNA catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CCR4-NOT complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of CCR4-NOT core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CCR4-NOT transcription complex subunit 9
    Names
    cell differentiation protein RCD1 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      105996442..106027686
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015111059.2 → XP_014966545.1  CCR4-NOT transcription complex subunit 9 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RJG7, A0A8J8XNV8, G7N8X3, H9FJD9
      Related
      ENSMMUP00000060461.1, ENSMMUT00000071695.2
      Conserved Domains (1) summary
      pfam04078
      Location:25 → 283
      Rcd1; Cell differentiation family, Rcd1-like

    2. XM_015111060.2 → XP_014966546.1  CCR4-NOT transcription complex subunit 9 isoform X2

      UniProtKB/TrEMBL
      F6U8W4, H9FJD9
      Related
      ENSMMUP00000026836.3, ENSMMUT00000028682.4
      Conserved Domains (1) summary
      pfam04078
      Location:25 → 244
      Rcd1; Cell differentiation family, Rcd1-like

    3. XM_015111061.2 → XP_014966547.1  CCR4-NOT transcription complex subunit 9 isoform X3

      UniProtKB/TrEMBL
      H9FJD9
      Conserved Domains (1) summary
      pfam04078
      Location:1 → 229
      Rcd1; Cell differentiation family, Rcd1-like
    Nucleotide Protein
    Heading Accession and Version

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