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    CATSPERD cation channel sperm associated auxiliary subunit delta [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696984, updated on 5-Mar-2024

    Summary

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    Gene symbol
    CATSPERD
    Gene description
    cation channel sperm associated auxiliary subunit delta
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CATSPERD in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (5638084..5698097)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (5873722..5932907)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L36 Neighboring gene lon peptidase 1, mitochondrial Neighboring gene proline rich 22 Neighboring gene dihydrouridine synthase 3 like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in flagellated sperm motility IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sperm capacitation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CatSper complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sperm principal piece IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cation channel sperm-associated protein subunit delta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      5638084..5698097
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015122579.2 → XP_014978065.2  cation channel sperm-associated protein subunit delta isoform X1

      Conserved Domains (1) summary
      pfam15020
      Location:72 → 798
      CATSPERD; Cation channel sperm-associated protein subunit delta

    2. XM_028839742.1 → XP_028695575.1  cation channel sperm-associated protein subunit delta isoform X2

      Conserved Domains (1) summary
      pfam15020
      Location:42 → 738
      CATSPERD; Cation channel sperm-associated protein subunit delta

    3. XM_015122582.2 → XP_014978068.2  cation channel sperm-associated protein subunit delta isoform X4

      Conserved Domains (1) summary
      pfam15020
      Location:42 → 709
      CATSPERD; Cation channel sperm-associated protein subunit delta

    4. XM_015122581.2 → XP_014978067.2  cation channel sperm-associated protein subunit delta isoform X3

      Conserved Domains (1) summary
      pfam15020
      Location:42 → 725
      CATSPERD; Cation channel sperm-associated protein subunit delta

    5. XM_015122583.2 → XP_014978069.2  cation channel sperm-associated protein subunit delta isoform X5

      Conserved Domains (1) summary
      pfam15020
      Location:1 → 677
      CATSPERD; Cation channel sperm-associated protein subunit delta
    Nucleotide Protein
    Heading Accession and Version

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