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    SYT12 synaptotagmin 12 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 721773, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SYT12provided by VGNC
    Official Full Name
    synaptotagmin 12provided by VGNC
    Primary source
    VGNC:VGNC:78159
    Locus tag
    EGK_05949
    See related
    Ensembl:ENSMMUG00000011741
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SYT12 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (7496852..7524796, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (7362172..7391150, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene ras homolog family member D Neighboring gene uncharacterized LOC106993183 Neighboring gene chromosome 14 C11orf86 homolog Neighboring gene uncharacterized LOC114672121

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNARE binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables clathrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylserine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium-ion regulated exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of calcium ion-dependent exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of dopamine secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptotagmin-12
    Names
    synaptotagmin XII

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      7496852..7524796 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833180.1 → XP_028689013.1  synaptotagmin-12 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AKX9, F7GWY8
      Related
      ENSMMUP00000077694.1, ENSMMUT00000091812.1
      Conserved Domains (2) summary
      cd08406
      Location:284 → 419
      C2B_Synaptotagmin-12; C2 domain second repeat present in Synaptotagmin 12
      cl14603
      Location:152 → 263
      C2; C2 domain

    2. XM_015113600.2 → XP_014969086.2  synaptotagmin-12 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AKX9, F7GWY8
      Related
      ENSMMUP00000015405.3, ENSMMUT00000016444.4
      Conserved Domains (2) summary
      cd08406
      Location:284 → 419
      C2B_Synaptotagmin-12; C2 domain second repeat present in Synaptotagmin 12
      cl14603
      Location:152 → 263
      C2; C2 domain

    3. XM_028833181.1 → XP_028689014.1  synaptotagmin-12 isoform X2

      UniProtKB/TrEMBL
      H9F5Y3
      Conserved Domains (2) summary
      cd08406
      Location:169 → 304
      C2B_Synaptotagmin-12; C2 domain second repeat present in Synaptotagmin 12
      cl14603
      Location:37 → 148
      C2; C2 domain
    Nucleotide Protein
    Heading Accession and Version

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