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    LIMD2 LIM domain containing 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717889, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LIMD2provided by VGNC
    Official Full Name
    LIM domain containing 2provided by VGNC
    Primary source
    VGNC:VGNC:74140
    Locus tag
    EGK_08863
    See related
    Ensembl:ENSMMUG00000016755
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LIMD2 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (60149302..60153814, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (57306380..57308611, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene protein FAM136A pseudogene Neighboring gene mitogen-activated protein kinase kinase kinase 3 Neighboring gene STE20 related adaptor alpha Neighboring gene coiled-coil domain containing 47

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament bundle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LIM domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260589.1 → NP_001247518.1  LIM domain-containing protein 2

      See identical proteins and their annotated locations for NP_001247518.1

      Status: PROVISIONAL

      Source sequence(s)
      JU477326
      UniProtKB/TrEMBL
      A0A8J8XCZ5, F7AIA7, G7NJ79
      Related
      ENSMMUP00000022025.2, ENSMMUT00000023542.4
      Conserved Domains (1) summary
      cd09486
      Location:40 → 92
      LIM_Eplin_like_1; a LIM domain subfamily on a group of proteins with unknown function

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      60149302..60153814 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028835764.1 → XP_028691597.1  LIM domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8J8XCZ5, F7AIA7, G7NJ79
      Conserved Domains (1) summary
      cd09486
      Location:40 → 92
      LIM_Eplin_like_1; a LIM domain subfamily on a group of proteins with unknown function

    2. XM_028835761.1 → XP_028691594.1  LIM domain-containing protein 2 isoform X1

      Conserved Domains (1) summary
      cd09486
      Location:122 → 174
      LIM_Eplin_like_1; a LIM domain subfamily on a group of proteins with unknown function

    3. XM_028835762.1 → XP_028691595.1  LIM domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8J8XCZ5, F7AIA7, G7NJ79
      Conserved Domains (1) summary
      cd09486
      Location:40 → 92
      LIM_Eplin_like_1; a LIM domain subfamily on a group of proteins with unknown function

    4. XM_028835763.1 → XP_028691596.1  LIM domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      A0A8J8XCZ5, F7AIA7, G7NJ79
      Conserved Domains (1) summary
      cd09486
      Location:40 → 92
      LIM_Eplin_like_1; a LIM domain subfamily on a group of proteins with unknown function
    Nucleotide Protein
    Heading Accession and Version

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