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    ANKIB1 ankyrin repeat and IBR domain containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703273, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ANKIB1provided by VGNC
    Official Full Name
    ankyrin repeat and IBR domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:69670
    Locus tag
    EGK_13946
    See related
    Ensembl:ENSMMUG00000005120
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ANKIB1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (113737339..113892430, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (117512149..117512433) , (117569499..117654755)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene GATA zinc finger domain containing 1 Neighboring gene endogenous retrovirus group W member 1, envelope Neighboring gene mitochondrial intermembrane space import and assembly protein 40 pseudogene Neighboring gene transmembrane BAX inhibitor motif containing 7 Neighboring gene KRIT1 ankyrin repeat containing Neighboring gene uncharacterized LOC114676989 Neighboring gene leucine rich repeats and death domain containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin conjugating enzyme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat and IBR domain-containing protein 1
    NP_001244698.1
    XP_028700718.1
    XP_028700719.1
    XP_028700720.1
    XP_028700721.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257769.1 → NP_001244698.1  ankyrin repeat and IBR domain-containing protein 1

      See identical proteins and their annotated locations for NP_001244698.1

      Status: PROVISIONAL

      Source sequence(s)
      JU321809
      UniProtKB/TrEMBL
      A0A5F8AC15, A0A8J8XCU0, F7BY13, G7MLW9
      Related
      ENSMMUP00000073466.1, ENSMMUT00000097704.1
      Conserved Domains (4) summary
      COG0666
      Location:28 → 198
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:47 → 76
      ANK; ANK repeat [structural motif]
      cd16774
      Location:332 → 388
      RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins
      pfam01485
      Location:402 → 475
      IBR; IBR domain, a half RING-finger domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      113737339..113892430 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028844888.1 → XP_028700721.1  ankyrin repeat and IBR domain-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A5F8AC15, F6ULZ1
      Related
      ENSMMUP00000035056.3, ENSMMUT00000042054.3
      Conserved Domains (4) summary
      sd00045
      Location:47 → 76
      ANK; ANK repeat [structural motif]
      cd16774
      Location:271 → 327
      RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins
      pfam00023
      Location:47 → 76
      Ank; Ankyrin repeat
      pfam01485
      Location:341 → 414
      IBR; IBR domain, a half RING-finger domain

    2. XM_028844887.1 → XP_028700720.1  ankyrin repeat and IBR domain-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AC15, H9FW21
      Related
      ENSMMUP00000074859.1, ENSMMUT00000089103.1
      Conserved Domains (4) summary
      COG0666
      Location:28 → 198
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:47 → 76
      ANK; ANK repeat [structural motif]
      cd16774
      Location:332 → 388
      RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins
      pfam01485
      Location:402 → 475
      IBR; IBR domain, a half RING-finger domain

    3. XM_028844886.1 → XP_028700719.1  ankyrin repeat and IBR domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AC15, A0A8J8XCU0, F7BY13, G7MLW9
      Conserved Domains (4) summary
      COG0666
      Location:28 → 198
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:47 → 76
      ANK; ANK repeat [structural motif]
      cd16774
      Location:332 → 388
      RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins
      pfam01485
      Location:402 → 475
      IBR; IBR domain, a half RING-finger domain

    4. XM_028844885.1 → XP_028700718.1  ankyrin repeat and IBR domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AC15, A0A8J8XCU0, F7BY13, G7MLW9
      Related
      ENSMMUP00000061946.1, ENSMMUT00000099476.1
      Conserved Domains (4) summary
      COG0666
      Location:28 → 198
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:47 → 76
      ANK; ANK repeat [structural motif]
      cd16774
      Location:332 → 388
      RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins
      pfam01485
      Location:402 → 475
      IBR; IBR domain, a half RING-finger domain
    Nucleotide Protein
    Heading Accession and Version

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