U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    IFT27 intraflagellar transport 27 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 697032, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    IFT27provided by VGNC
    Official Full Name
    intraflagellar transport 27provided by VGNC
    Primary source
    VGNC:VGNC:81421
    See related
    Ensembl:ENSMMUG00000008775
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See IFT27 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (14789037..14807128)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (78665254..78683535, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene neutrophil cytosolic factor 4 Neighboring gene parvalbumin Neighboring gene uncharacterized LOC114670361 Neighboring gene calcium voltage-gated channel auxiliary subunit gamma 2 Neighboring gene uncharacterized LOC114670363

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intraciliary transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    intraflagellar transport protein 27 homolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      14789037..14807128
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002798383.3 → XP_002798429.2  intraflagellar transport protein 27 homolog isoform X4

      UniProtKB/TrEMBL
      F7DKH2, H9FMU8
      Related
      ENSMMUP00000070192.1, ENSMMUT00000110215.1
      Conserved Domains (1) summary
      cd04101
      Location:6 → 172
      RabL4; Rab GTPase-like family 4 (Rab-like4)

    2. XM_015150247.2 → XP_015005733.2  intraflagellar transport protein 27 homolog isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZY05
      Related
      ENSMMUP00000070025.1, ENSMMUT00000079733.1
      Conserved Domains (1) summary
      cd04101
      Location:29 → 191
      RabL4; Rab GTPase-like family 4 (Rab-like4)

    3. XM_015150252.2 → XP_015005738.2  intraflagellar transport protein 27 homolog isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZGT0
      Related
      ENSMMUP00000063833.1, ENSMMUT00000104264.1
      Conserved Domains (1) summary
      cl21455
      Location:29 → 136
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    4. XM_028827748.1 → XP_028683581.1  intraflagellar transport protein 27 homolog isoform X5

      UniProtKB/TrEMBL
      H9FMU8
      Conserved Domains (1) summary
      cd04101
      Location:8 → 168
      RabL4; Rab GTPase-like family 4 (Rab-like4)

    5. XM_015150249.2 → XP_015005735.2  intraflagellar transport protein 27 homolog isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZY05
      Conserved Domains (1) summary
      cd04101
      Location:24 → 189
      RabL4; Rab GTPase-like family 4 (Rab-like4)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.