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    RBL2 RB transcriptional corepressor like 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696992, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RBL2provided by VGNC
    Official Full Name
    RB transcriptional corepressor like 2provided by VGNC
    Primary source
    VGNC:VGNC:99582
    See related
    Ensembl:ENSMMUG00000043440
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RBL2 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (40495165..40623360)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (37400227..37528626)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene U3 small nucleolar ribonucleoprotein protein MPP10 Neighboring gene golgin A6 family like 2 Neighboring gene 60S ribosomal protein L6 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene AKT interacting protein Neighboring gene RPGRIP1 like Neighboring gene FTO alpha-ketoglutarate dependent dioxygenase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of G1/S transition of mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    retinoblastoma-like protein 2
    Names
    retinoblastoma-like 2 (p130)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      40495165..40623360
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015126138.2 → XP_014981624.1  retinoblastoma-like protein 2 isoform X5

      UniProtKB/TrEMBL
      H9ZBY9
      Conserved Domains (3) summary
      pfam01857
      Location:704 → 887
      RB_B; Retinoblastoma-associated protein B domain
      pfam01858
      Location:286 → 478
      RB_A; Retinoblastoma-associated protein A domain
      pfam11934
      Location:1 → 105
      DUF3452; Domain of unknown function (DUF3452)

    2. XM_015126135.2 → XP_014981621.1  retinoblastoma-like protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QDE7, H9ZBY9
      Related
      ENSMMUP00000046066.1, ENSMMUT00000062757.2
      Conserved Domains (3) summary
      pfam01857
      Location:835 → 1018
      RB_B; Retinoblastoma-associated protein B domain
      pfam01858
      Location:417 → 609
      RB_A; Retinoblastoma-associated protein A domain
      pfam11934
      Location:104 → 236
      DUF3452; Domain of unknown function (DUF3452)

    3. XM_015126136.2 → XP_014981622.1  retinoblastoma-like protein 2 isoform X2

      UniProtKB/TrEMBL
      G7NPA8
      Conserved Domains (3) summary
      pfam01857
      Location:835 → 1017
      RB_B; Retinoblastoma-associated protein B domain
      pfam01858
      Location:417 → 609
      RB_A; Retinoblastoma-associated protein A domain
      pfam11934
      Location:104 → 236
      DUF3452; Domain of unknown function (DUF3452)

    4. XM_015126140.2 → XP_014981626.1  retinoblastoma-like protein 2 isoform X6

      UniProtKB/TrEMBL
      A0A1D5QRR9
      Conserved Domains (3) summary
      pfam01857
      Location:648 → 831
      RB_B; Retinoblastoma-associated protein B domain
      pfam01858
      Location:230 → 422
      RB_A; Retinoblastoma-associated protein A domain
      pfam11934
      Location:26 → 49
      DUF3452; Domain of unknown function (DUF3452)

    5. XM_015126137.2 → XP_014981623.1  retinoblastoma-like protein 2 isoform X3

      UniProtKB/TrEMBL
      H9ZBY9
      Conserved Domains (3) summary
      pfam01857
      Location:761 → 944
      RB_B; Retinoblastoma-associated protein B domain
      pfam01858
      Location:343 → 535
      RB_A; Retinoblastoma-associated protein A domain
      pfam11934
      Location:30 → 162
      DUF3452; Domain of unknown function (DUF3452)

    6. XM_028841017.1 → XP_028696850.1  retinoblastoma-like protein 2 isoform X4

      UniProtKB/TrEMBL
      G7NPA8
      Conserved Domains (4) summary
      pfam01858
      Location:343 → 535
      RB_A; Retinoblastoma-associated protein A domain
      pfam15662
      Location:859 → 915
      SPATA3; Spermatogenesis-associated protein 3 family
      pfam01857
      Location:763 → 944
      RB_B; Retinoblastoma-associated protein B domain
      pfam11934
      Location:30 → 162
      DUF3452; Domain of unknown function (DUF3452)
    Nucleotide Protein
    Heading Accession and Version

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