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    BTBD1 BTB domain containing 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718696, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BTBD1provided by VGNC
    Official Full Name
    BTB domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:84315
    See related
    Ensembl:ENSMMUG00000041714
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BTBD1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (62643042..62701052)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (61365054..61423889, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene HDGF like 3 Neighboring gene transmembrane 6 superfamily member 1 Neighboring gene U7 small nuclear RNA Neighboring gene fatty acid-binding protein 5 pseudogene Neighboring gene chromosome 7 C15orf40 homolog Neighboring gene RNA guanine-7 methyltransferase activating subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in neurogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BTB/POZ domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      62643042..62701052
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028851258.1 → XP_028707091.1  BTB/POZ domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q795, H9FVW5
      Related
      ENSMMUP00000043911.2, ENSMMUT00000065245.2
      Conserved Domains (3) summary
      pfam08005
      Location:333 → 479
      PHR; PHR domain
      cd18346
      Location:46 → 178
      BTB_POZ_BTBD1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 1 (BTBD1)
      cd18522
      Location:174 → 280
      BACK_BTBD1; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 1 (BTBD1)

    2. XM_028851259.1 → XP_028707092.1  BTB/POZ domain-containing protein 1 isoform X2

      Conserved Domains (3) summary
      pfam08005
      Location:333 → 351
      PHR; PHR domain
      cd18346
      Location:46 → 178
      BTB_POZ_BTBD1; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 1 (BTBD1)
      cl28903
      Location:174 → 280
      BACK; BACK (BTB and C-terminal Kelch) domain
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials