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    KCNN4 potassium calcium-activated channel subfamily N member 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712383, updated on 17-Aug-2024

    Summary

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    Official Symbol
    KCNN4provided by VGNC
    Official Full Name
    potassium calcium-activated channel subfamily N member 4provided by VGNC
    Primary source
    VGNC:VGNC:111915
    See related
    Ensembl:ENSMMUG00000021267
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See KCNN4 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (43835459..43853608, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (39049201..39067238, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene immunity related GTPase cinema Neighboring gene SMG9 nonsense mediated mRNA decay factor Neighboring gene uncharacterized LOC106994789 Neighboring gene LY6/PLAUR domain containing 5 Neighboring gene uncharacterized LOC114674059 Neighboring gene zinc finger protein 283

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables intermediate conductance calcium-activated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small conductance calcium-activated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    intermediate conductance calcium-activated potassium channel protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      43835459..43853608 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015124163.2 → XP_014979649.2  intermediate conductance calcium-activated potassium channel protein 4

      UniProtKB/TrEMBL
      A0A1D5Q3T4, G7NM88
      Related
      ENSMMUP00000042696.2, ENSMMUT00000061558.2
      Conserved Domains (3) summary
      smart01053
      Location:304 → 376
      CaMBD; Calmodulin binding domain
      pfam03530
      Location:15 → 121
      SK_channel; Calcium-activated SK potassium channel
      pfam07885
      Location:237 → 290
      Ion_trans_2; Ion channel

    2. XM_015124164.2 → XP_014979650.2  intermediate conductance calcium-activated potassium channel protein 4

      UniProtKB/TrEMBL
      A0A1D5Q3T4, G7NM88
      Conserved Domains (3) summary
      smart01053
      Location:304 → 376
      CaMBD; Calmodulin binding domain
      pfam03530
      Location:15 → 121
      SK_channel; Calcium-activated SK potassium channel
      pfam07885
      Location:237 → 290
      Ion_trans_2; Ion channel
    Nucleotide Protein
    Heading Accession and Version

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