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    PARVG parvin gamma [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712624, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PARVGprovided by VGNC
    Official Full Name
    parvin gammaprovided by VGNC
    Primary source
    VGNC:VGNC:75607
    Locus tag
    EGK_03136
    See related
    Ensembl:ENSMMUG00000014203
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PARVG in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (7263172..7303326, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (86331807..86358762)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107000685 Neighboring gene shisa like 1 Neighboring gene uncharacterized LOC114670342 Neighboring gene parvin beta Neighboring gene microRNA mir-7205 Neighboring gene SAMM50 sorting and assembly machinery component

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell projection assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment or maintenance of cell polarity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in substrate adhesion-dependent cell spreading IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in focal adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gamma-parvin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      7263172..7303326 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028827616.1 → XP_028683449.1  gamma-parvin isoform X1

      UniProtKB/TrEMBL
      A0A5F8A6Y3
      Conserved Domains (2) summary
      pfam00307
      Location:45 → 151
      CH; Calponin homology (CH) domain
      cl00030
      Location:212 → 307
      CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...

    2. XM_028827617.1 → XP_028683450.1  gamma-parvin isoform X3

      UniProtKB/TrEMBL
      A0A5F8ATD1, F6Y644
      Related
      ENSMMUP00000080664.1, ENSMMUT00000085156.1
      Conserved Domains (1) summary
      pfam00307
      Location:45 → 151
      CH; Calponin homology (CH) domain

    3. XM_015150536.2 → XP_015006022.1  gamma-parvin isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZPX8, F6Y644
      Related
      ENSMMUP00000066685.1, ENSMMUT00000102505.1
      Conserved Domains (1) summary
      pfam00307
      Location:212 → 334
      CH; Calponin homology (CH) domain

    4. XM_015150537.2 → XP_015006023.1  gamma-parvin isoform X4

      UniProtKB/TrEMBL
      A0A5F7ZSN4, A0A8J8YEE1, F6Y644, G7N458
      Related
      ENSMMUP00000068626.1, ENSMMUT00000081476.1
      Conserved Domains (1) summary
      pfam00307
      Location:212 → 312
      CH; Calponin homology (CH) domain

    5. XM_015150540.2 → XP_015006026.1  gamma-parvin isoform X6

      UniProtKB/TrEMBL
      A0A5F8AVC4
      Conserved Domains (2) summary
      cd21305
      Location:45 → 150
      CH_PARVG_rpt1; first calponin homology (CH) domain found in gamma-parvin
      cl00030
      Location:196 → 271
      CH_SF; calponin homology (CH) domain superfamily

    6. XM_015150538.2 → XP_015006024.1  gamma-parvin isoform X5

      UniProtKB/TrEMBL
      A0A5F8A129, F6Y644
      Related
      ENSMMUP00000070608.1, ENSMMUT00000080453.1
      Conserved Domains (2) summary
      cd21305
      Location:45 → 150
      CH_PARVG_rpt1; first calponin homology (CH) domain found in gamma-parvin
      cl00030
      Location:196 → 271
      CH_SF; calponin homology (CH) domain superfamily

    7. XM_015150541.2 → XP_015006027.1  gamma-parvin isoform X7

      UniProtKB/TrEMBL
      A0A5F8AVC4
      Related
      ENSMMUP00000080986.1, ENSMMUT00000106387.1
      Conserved Domains (2) summary
      cd21305
      Location:45 → 150
      CH_PARVG_rpt1; first calponin homology (CH) domain found in gamma-parvin
      cl00030
      Location:196 → 272
      CH_SF; calponin homology (CH) domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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