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    ATG9A autophagy related 9A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702263, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ATG9Aprovided by VGNC
    Official Full Name
    autophagy related 9Aprovided by VGNC
    Primary source
    VGNC:VGNC:81180
    Locus tag
    EGK_04816
    See related
    Ensembl:ENSMMUG00000019619
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ATG9A in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 12 NC_041765.1 (106655612..106665661, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 12 NC_027904.1 (101347547..101357597, complement)

    Chromosome 12 - NC_041765.1Genomic Context describing neighboring genes Neighboring gene zinc finger AN1-type containing 2B Neighboring gene ATP binding cassette subfamily B member 6 (LAN blood group) Neighboring gene microRNA mir-1240 Neighboring gene ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 Neighboring gene galactosidase beta 1 like Neighboring gene serine/threonine kinase 16

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in autophagy of mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in autophagosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    autophagy-related protein 9A
    Names
    ATG9 autophagy related 9 homolog A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257895.1 → NP_001244824.1  autophagy-related protein 9A

      See identical proteins and their annotated locations for NP_001244824.1

      Status: PROVISIONAL

      Source sequence(s)
      JU336343
      UniProtKB/TrEMBL
      A0A8J8XUD8, F6QR66, F7B1E9, G7N8Z2
      Related
      ENSMMUP00000080420.1, ENSMMUT00000104663.1
      Conserved Domains (2) summary
      pfam04109
      Location:37 → 525
      APG9; Autophagy protein Apg9
      cl41730
      Location:727 → 833
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041765.1 Reference Mmul_10 Primary Assembly

      Range
      106655612..106665661 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015111003.2 → XP_014966489.2  autophagy-related protein 9A isoform X1

      UniProtKB/TrEMBL
      A0A8J8XUD8, F6QR66, F7B1E9, G7N8Z2
      Conserved Domains (2) summary
      pfam04109
      Location:37 → 525
      APG9; Autophagy protein Apg9
      cl41730
      Location:727 → 833
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    2. XM_015110996.2 → XP_014966482.2  autophagy-related protein 9A isoform X1

      UniProtKB/TrEMBL
      A0A8J8XUD8, F6QR66, F7B1E9, G7N8Z2
      Related
      ENSMMUP00000080264.1, ENSMMUT00000096977.1
      Conserved Domains (2) summary
      pfam04109
      Location:37 → 525
      APG9; Autophagy protein Apg9
      cl41730
      Location:727 → 833
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    3. XM_015110999.2 → XP_014966485.2  autophagy-related protein 9A isoform X1

      UniProtKB/TrEMBL
      A0A8J8XUD8, F6QR66, F7B1E9, G7N8Z2
      Conserved Domains (2) summary
      pfam04109
      Location:37 → 525
      APG9; Autophagy protein Apg9
      cl41730
      Location:727 → 833
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    4. XM_015110998.2 → XP_014966484.2  autophagy-related protein 9A isoform X1

      UniProtKB/TrEMBL
      A0A8J8XUD8, F6QR66, F7B1E9, G7N8Z2
      Conserved Domains (2) summary
      pfam04109
      Location:37 → 525
      APG9; Autophagy protein Apg9
      cl41730
      Location:727 → 833
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    5. XM_015110995.2 → XP_014966481.2  autophagy-related protein 9A isoform X1

      UniProtKB/TrEMBL
      A0A8J8XUD8, F6QR66, F7B1E9, G7N8Z2
      Conserved Domains (2) summary
      pfam04109
      Location:37 → 525
      APG9; Autophagy protein Apg9
      cl41730
      Location:727 → 833
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    6. XM_015110994.2 → XP_014966480.2  autophagy-related protein 9A isoform X1

      UniProtKB/TrEMBL
      A0A8J8XUD8, F6QR66, F7B1E9, G7N8Z2
      Conserved Domains (2) summary
      pfam04109
      Location:37 → 525
      APG9; Autophagy protein Apg9
      cl41730
      Location:727 → 833
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    7. XM_028830486.1 → XP_028686319.1  autophagy-related protein 9A isoform X1

      UniProtKB/TrEMBL
      A0A8J8XUD8, F6QR66, F7B1E9, G7N8Z2
      Conserved Domains (2) summary
      pfam04109
      Location:37 → 525
      APG9; Autophagy protein Apg9
      cl41730
      Location:727 → 833
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    8. XM_015111002.2 → XP_014966488.2  autophagy-related protein 9A isoform X1

      UniProtKB/TrEMBL
      A0A8J8XUD8, F6QR66, F7B1E9, G7N8Z2
      Related
      ENSMMUP00000074334.1, ENSMMUT00000097379.1
      Conserved Domains (2) summary
      pfam04109
      Location:37 → 525
      APG9; Autophagy protein Apg9
      cl41730
      Location:727 → 833
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    9. XM_015110997.2 → XP_014966483.2  autophagy-related protein 9A isoform X1

      UniProtKB/TrEMBL
      A0A8J8XUD8, F6QR66, F7B1E9, G7N8Z2
      Conserved Domains (2) summary
      pfam04109
      Location:37 → 525
      APG9; Autophagy protein Apg9
      cl41730
      Location:727 → 833
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    10. XM_015111007.2 → XP_014966493.2  autophagy-related protein 9A isoform X2

      UniProtKB/TrEMBL
      F6QR66
      Conserved Domains (1) summary
      pfam04109
      Location:83 → 432
      APG9; Autophagy protein Apg9
    Nucleotide Protein
    Heading Accession and Version

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