U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ZFAT zinc finger and AT-hook domain containing [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698512, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ZFATprovided by VGNC
    Official Full Name
    zinc finger and AT-hook domain containingprovided by VGNC
    Primary source
    VGNC:VGNC:79209
    Locus tag
    EGK_19295
    See related
    Ensembl:ENSMMUG00000004918
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ZFAT in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (134752560..134987956, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (133777600..134012910, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114680351 Neighboring gene uncharacterized LOC114680352 Neighboring gene uncharacterized LOC106999947 Neighboring gene microRNA mir-30b

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    zinc finger protein ZFAT

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      134752560..134987956 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015146034.2 → XP_015001520.2  zinc finger protein ZFAT isoform X1

      UniProtKB/TrEMBL
      F6YWG7
      Related
      ENSMMUP00000031921.3, ENSMMUT00000038839.3
      Conserved Domains (5) summary
      PRK10811
      Location:1109 → 1243
      rne; ribonuclease E; Reviewed
      sd00017
      Location:274 → 294
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13909
      Location:300 → 324
      zf-H2C2_5; C2H2-type zinc-finger domain
      pfam00096
      Location:272 → 294
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:286 → 310
      zf-H2C2_2; Zinc-finger double domain

    2. XM_015146035.2 → XP_015001521.2  zinc finger protein ZFAT isoform X2

      UniProtKB/TrEMBL
      A0A1D5RGV0, F6YWG7
      Related
      ENSMMUP00000059544.2, ENSMMUT00000065454.2
      Conserved Domains (5) summary
      PRK10811
      Location:1108 → 1242
      rne; ribonuclease E; Reviewed
      sd00017
      Location:273 → 293
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13909
      Location:299 → 323
      zf-H2C2_5; C2H2-type zinc-finger domain
      pfam00096
      Location:271 → 293
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:285 → 309
      zf-H2C2_2; Zinc-finger double domain

    3. XM_015146036.2 → XP_015001522.2  zinc finger protein ZFAT isoform X3

      UniProtKB/TrEMBL
      F6YWG7
      Conserved Domains (5) summary
      PRK10811
      Location:1096 → 1230
      rne; ribonuclease E; Reviewed
      sd00017
      Location:261 → 281
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13909
      Location:287 → 311
      zf-H2C2_5; C2H2-type zinc-finger domain
      pfam00096
      Location:259 → 281
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:273 → 297
      zf-H2C2_2; Zinc-finger double domain

    4. XM_028852931.1 → XP_028708764.1  zinc finger protein ZFAT isoform X4

      UniProtKB/TrEMBL
      A0A1D5RIL5, F6YWG7
      Related
      ENSMMUP00000060159.2, ENSMMUT00000064840.2
      Conserved Domains (5) summary
      PRK10811
      Location:1046 → 1180
      rne; ribonuclease E; Reviewed
      sd00017
      Location:211 → 231
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13909
      Location:237 → 261
      zf-H2C2_5; C2H2-type zinc-finger domain
      pfam00096
      Location:209 → 231
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:223 → 247
      zf-H2C2_2; Zinc-finger double domain

    5. XM_028852932.1 → XP_028708765.1  zinc finger protein ZFAT isoform X5

      UniProtKB/TrEMBL
      F6YWG7
      Conserved Domains (5) summary
      PRK10811
      Location:1039 → 1173
      rne; ribonuclease E; Reviewed
      sd00017
      Location:204 → 224
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13909
      Location:230 → 254
      zf-H2C2_5; C2H2-type zinc-finger domain
      pfam00096
      Location:202 → 224
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:216 → 240
      zf-H2C2_2; Zinc-finger double domain

    6. XM_015146037.2 → XP_015001523.2  zinc finger protein ZFAT isoform X7

      UniProtKB/TrEMBL
      F6YWG7
      Conserved Domains (4) summary
      sd00017
      Location:261 → 281
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13909
      Location:287 → 311
      zf-H2C2_5; C2H2-type zinc-finger domain
      pfam00096
      Location:259 → 281
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:273 → 297
      zf-H2C2_2; Zinc-finger double domain

    7. XM_028852933.1 → XP_028708766.1  zinc finger protein ZFAT isoform X6

      UniProtKB/TrEMBL
      G7N059
      Conserved Domains (4) summary
      sd00017
      Location:274 → 294
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13909
      Location:300 → 324
      zf-H2C2_5; C2H2-type zinc-finger domain
      pfam00096
      Location:272 → 294
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:286 → 310
      zf-H2C2_2; Zinc-finger double domain

    RNA

    1. XR_003732558.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.