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    POC1A POC1 centriolar protein A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698157, updated on 17-Aug-2024

    Summary

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    Official Symbol
    POC1Aprovided by VGNC
    Official Full Name
    POC1 centriolar protein Aprovided by VGNC
    Primary source
    VGNC:VGNC:76102
    Locus tag
    EGK_11572
    See related
    Ensembl:ENSMMUG00000012485
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See POC1A in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (108216339..108296853, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (90068852..90151205)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene dual specificity phosphatase 7 Neighboring gene uncharacterized LOC114676141 Neighboring gene fructose-bisphosphate aldolase A-like Neighboring gene 5'-aminolevulinate synthase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centriole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    POC1 centriolar protein homolog A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      108216339..108296853 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015130762.2 → XP_014986248.1  POC1 centriolar protein homolog A isoform X2

      UniProtKB/TrEMBL
      F7FAV6, H9YZ25
      Related
      ENSMMUP00000016390.2, ENSMMUT00000017502.3
      Conserved Domains (3) summary
      COG2319
      Location:13 → 293
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:11 → 292
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:23 → 59
      7WD40; WD40 repeat [structural motif]

    2. XM_001086686.4 → XP_001086686.2  POC1 centriolar protein homolog A isoform X1

      See identical proteins and their annotated locations for XP_001086686.2

      UniProtKB/TrEMBL
      A0A1D5QF69, A0A8J8YIX8, G7ML37, H9YZ25
      Related
      ENSMMUP00000046688.2, ENSMMUT00000059139.2
      Conserved Domains (2) summary
      cd00200
      Location:11 → 299
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:23 → 59
      7WD40; WD40 repeat [structural motif]

    3. XM_015130763.2 → XP_014986249.1  POC1 centriolar protein homolog A isoform X3

      Conserved Domains (2) summary
      cd00200
      Location:19 → 260
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:26 → 63
      7WD40; WD40 repeat [structural motif]

    4. XM_002802800.3 → XP_002802846.1  POC1 centriolar protein homolog A isoform X3

      See identical proteins and their annotated locations for XP_002802846.1

      Conserved Domains (2) summary
      cd00200
      Location:19 → 260
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:26 → 63
      7WD40; WD40 repeat [structural motif]

    RNA

    1. XR_003727318.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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