U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    NSUN6 NOP2/Sun RNA methyltransferase 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701490, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    NSUN6provided by VGNC
    Official Full Name
    NOP2/Sun RNA methyltransferase 6provided by VGNC
    Primary source
    VGNC:VGNC:75452
    See related
    Ensembl:ENSMMUG00000007451
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See NSUN6 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (19686118..19804272, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (18751068..18925753, complement)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene calcium voltage-gated channel auxiliary subunit beta 2 Neighboring gene uncharacterized LOC107000058 Neighboring gene uncharacterized LOC107000059 Neighboring gene ADP ribosylation factor like GTPase 5B Neighboring gene apoptosis-inducing factor 1, mitochondrial-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative methyltransferase NSUN6
    Names
    NOP2/Sun RNA methyltransferase family member 6

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      19686118..19804272 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028826040.1 → XP_028681873.1  putative methyltransferase NSUN6 isoform X6

      Conserved Domains (2) summary
      COG0144
      Location:74 → 324
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]
      cd21150
      Location:1 → 61
      PUA_NSun6-like; PUA RNA-binding domain of the SAM-dependent methyltransferase NSun6 and similar proteins

    2. XM_028826039.1 → XP_028681872.1  putative methyltransferase NSUN6 isoform X5

      Conserved Domains (2) summary
      smart00359
      Location:16 → 103
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:116 → 366
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    3. XM_015146572.2 → XP_015002058.2  putative methyltransferase NSUN6 isoform X2

      UniProtKB/TrEMBL
      H9EW86
      Conserved Domains (2) summary
      smart00359
      Location:114 → 201
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:214 → 464
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    4. XM_015146571.2 → XP_015002057.2  putative methyltransferase NSUN6 isoform X1

      UniProtKB/TrEMBL
      F6SWB4, H9EW86
      Related
      ENSMMUP00000009778.3, ENSMMUT00000010418.4
      Conserved Domains (2) summary
      smart00359
      Location:115 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:215 → 465
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    5. XM_028826037.1 → XP_028681870.1  putative methyltransferase NSUN6 isoform X3

      UniProtKB/TrEMBL
      H9EW86
      Conserved Domains (2) summary
      smart00359
      Location:111 → 198
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:211 → 461
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    6. XM_028826038.1 → XP_028681871.1  putative methyltransferase NSUN6 isoform X4

      UniProtKB/TrEMBL
      A0A1D5Q2G6, H9EW86
      Related
      ENSMMUP00000042228.2, ENSMMUT00000077070.2
      Conserved Domains (2) summary
      smart00359
      Location:115 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:215 → 398
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.