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    LRRC39 leucine rich repeat containing 39 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711471, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LRRC39provided by VGNC
    Official Full Name
    leucine rich repeat containing 39provided by VGNC
    Primary source
    VGNC:VGNC:81433
    See related
    Ensembl:ENSMMUG00000004241
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LRRC39 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (123968244..124000924)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (101019896..101044212, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene RNA 3'-terminal phosphate cyclase Neighboring gene microRNA mir-553 Neighboring gene uncharacterized LOC114671443 Neighboring gene dihydrolipoamide branched chain transacylase E2 Neighboring gene tRNA methyltransferase 13 homolog Neighboring gene SAS-6 centriolar assembly protein Neighboring gene major facilitator superfamily domain containing 14A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat-containing protein 39

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      123968244..124000924
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015145879.2 → XP_015001365.2  leucine-rich repeat-containing protein 39 isoform X2

      UniProtKB/TrEMBL
      A0A5F8AKR9, A0A5F8AN40
      Related
      ENSMMUP00000078794.1, ENSMMUT00000109363.1
      Conserved Domains (2) summary
      COG4886
      Location:19 → 283
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:85 → 107
      LRR_RI; leucine-rich repeat [structural motif]

    2. XM_028831236.1 → XP_028687069.1  leucine-rich repeat-containing protein 39 isoform X3

      Conserved Domains (3) summary
      COG4886
      Location:19 → 261
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00031
      Location:270 → 283
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:85 → 107
      LRR_RI; leucine-rich repeat [structural motif]

    3. XM_015145874.2 → XP_015001360.2  leucine-rich repeat-containing protein 39 isoform X1

      UniProtKB/TrEMBL
      A0A5F8AKR9
      Related
      ENSMMUP00000039633.2, ENSMMUT00000046597.3
      Conserved Domains (2) summary
      COG4886
      Location:19 → 283
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:85 → 107
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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