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    OPN3 opsin 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707436, updated on 17-Aug-2024

    Summary

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    Official Symbol
    OPN3provided by VGNC
    Official Full Name
    opsin 3provided by VGNC
    Primary source
    VGNC:VGNC:75400
    See related
    Ensembl:ENSMMUG00000005669
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    opsin-3
    Orthologs
    human mouse all
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    Genomic context

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    See OPN3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (7442853..7490300)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (218005436..218084789, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106995194 Neighboring gene 60S ribosomal protein L6 pseudogene Neighboring gene WD repeat domain 64 Neighboring gene CHM like Rab escort protein Neighboring gene kynurenine 3-monooxygenase Neighboring gene uncharacterized LOC114678730 Neighboring gene fumarate hydratase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in photoreceptor outer segment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    opsin-3
    Names
    opsin 3 (encephalopsin, panopsin)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      7442853..7490300
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001094239.4 → XP_001094239.1  opsin-3

      See identical proteins and their annotated locations for XP_001094239.1

      UniProtKB/TrEMBL
      H9F995
      Related
      ENSMMUP00000007491.4, ENSMMUT00000007970.4
      Conserved Domains (1) summary
      cd15078
      Location:58 → 316
      7tmA_Encephalopsin; encephalopsins (opsin-3), member of the class A family of seven-transmembrane G protein-coupled receptors
    Nucleotide Protein
    Heading Accession and Version

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