U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    WDR54 WD repeat domain 54 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708605, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    WDR54provided by VGNC
    Official Full Name
    WD repeat domain 54provided by VGNC
    Primary source
    VGNC:VGNC:79541
    See related
    Ensembl:ENSMMUG00000002719
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See WDR54 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (34391473..34395493, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (75439677..75443694)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene INO80 complex subunit B Neighboring gene rhotekin Neighboring gene chromosome 13 C2orf81 homolog Neighboring gene high mobility group protein HMG-I/HMG-Y-like Neighboring gene uncharacterized LOC114671932 Neighboring gene uncharacterized LOC114671933

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cilium-dependent cell motility IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sperm axoneme assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    WD repeat-containing protein 54

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      34391473..34395493 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001108927.4 → XP_001108927.3  WD repeat-containing protein 54 isoform X2

      UniProtKB/TrEMBL
      F7HMV6, G7NAE0
      Related
      ENSMMUP00000003657.3, ENSMMUT00000003869.3
      Conserved Domains (2) summary
      COG2319
      Location:180 → 381
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:121 → 162
      7WD40; WD40 repeat [structural motif]

    2. XM_028832365.1 → XP_028688198.1  WD repeat-containing protein 54 isoform X1

      UniProtKB/TrEMBL
      G7NAE0
      Conserved Domains (2) summary
      COG2319
      Location:190 → 386
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:121 → 162
      7WD40; WD40 repeat [structural motif]

    3. XM_028832366.1 → XP_028688199.1  WD repeat-containing protein 54 isoform X3

      UniProtKB/TrEMBL
      G7NAE0
      Conserved Domains (2) summary
      COG2319
      Location:179 → 375
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:110 → 151
      7WD40; WD40 repeat [structural motif]

    RNA

    1. XR_003722103.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials