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    MGAT5B alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708299, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MGAT5Bprovided by VGNC
    Official Full Name
    alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase Bprovided by VGNC
    Primary source
    VGNC:VGNC:74566
    Locus tag
    EGK_09024
    See related
    Ensembl:ENSMMUG00000016300
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See MGAT5B in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (73253461..73333442)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (70607026..70729856)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene major facilitator superfamily domain containing 11 Neighboring gene uncharacterized LOC114673192 Neighboring gene small Cajal body-specific RNA 16 Neighboring gene uncharacterized LOC114673193

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein N-linked glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B
    Names
    mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B
    NP_001253315.1
    XP_014975829.1
    XP_014975830.1
    XP_014975831.1
    XP_014975832.1
    XP_028691388.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266386.1 → NP_001253315.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B

      See identical proteins and their annotated locations for NP_001253315.1

      Status: PROVISIONAL

      Source sequence(s)
      JU333067
      UniProtKB/TrEMBL
      F7AHP5, F7GUH0, H9FQB3
      Conserved Domains (1) summary
      pfam15024
      Location:184 → 777
      Glyco_transf_18; Glycosyltransferase family 18

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      73253461..73333442
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015120344.2 → XP_014975830.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X2

      UniProtKB/TrEMBL
      F7AHP5, F7GUH0
      Related
      ENSMMUP00000034005.3, ENSMMUT00000040976.3
      Conserved Domains (1) summary
      pfam15024
      Location:184 → 775
      Glyco_transf_18; Glycosyltransferase family 18

    2. XM_015120345.2 → XP_014975831.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X3

      UniProtKB/TrEMBL
      F7AHN1
      Conserved Domains (1) summary
      pfam15024
      Location:163 → 720
      Glyco_transf_18; Glycosyltransferase family 18

    3. XM_028835555.1 → XP_028691388.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X5

      UniProtKB/TrEMBL
      F7AHP5, F7GUH0
      Conserved Domains (1) summary
      pfam15024
      Location:149 → 694
      Glyco_transf_18; Glycosyltransferase family 18

    4. XM_015120346.2 → XP_014975832.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X4

      UniProtKB/TrEMBL
      F7AHP5, F7GUH0
      Conserved Domains (1) summary
      pfam15024
      Location:121 → 714
      Glyco_transf_18; Glycosyltransferase family 18

    5. XM_015120343.2 → XP_014975829.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X1

      UniProtKB/TrEMBL
      F7AHP5, F7GUH0, G7NGZ1
      Related
      ENSMMUP00000034006.3, ENSMMUT00000040977.3
      Conserved Domains (1) summary
      pfam15024
      Location:195 → 786
      Glyco_transf_18; Glycosyltransferase family 18
    Nucleotide Protein
    Heading Accession and Version

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