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    GTF2A1L general transcription factor IIA subunit 1 like [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715957, updated on 5-Mar-2024

    Summary

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    Gene symbol
    GTF2A1L
    Gene description
    general transcription factor IIA subunit 1 like
    See related
    Ensembl:ENSMMUG00000030838
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    SALF; STON1-GTF2A1L
    Annotation information
    Note: XM_002808036.1 is predicted based on the human STON1-GTF2A1L readthrough (GeneID:286749) which is unsupported in macaque. However, due to macaque Build 1.2 genome discrepancies, the individual STON1 and GTF2A1L genes can't be represented. [17 Jun 2014]
    Orthologs
    human mouse all
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    Genomic context

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    See GTF2A1L in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (60074077..60135250, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (49449193..49510381)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106992943 Neighboring gene luteinizing hormone/choriogonadotropin receptor Neighboring gene serine/arginine-rich splicing factor 10 pseudogene Neighboring gene uncharacterized LOC114671711 Neighboring gene stonin 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription initiation at RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription factor TFIIA complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TFIIA-alpha and beta-like factor
    Names
    stonin-1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      60074077..60135250 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028831686.1 → XP_028687519.1  TFIIA-alpha and beta-like factor isoform X2

      UniProtKB/TrEMBL
      A0A1D5R1N8, F7FZJ9
      Related
      ENSMMUP00000054222.1, ENSMMUT00000055526.2
      Conserved Domains (1) summary
      pfam03153
      Location:8 → 444
      TFIIA; Transcription factor IIA, alpha/beta subunit

    2. XM_015112323.2 → XP_014967809.1  TFIIA-alpha and beta-like factor isoform X1

      UniProtKB/TrEMBL
      A0A1D5QZ69, F7FZJ9
      Related
      ENSMMUP00000053351.1, ENSMMUT00000074414.2
      Conserved Domains (1) summary
      pfam03153
      Location:10 → 478
      TFIIA; Transcription factor IIA, alpha/beta subunit
    Nucleotide Protein
    Heading Accession and Version

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