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    PARVB parvin beta [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715859, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PARVBprovided by VGNC
    Official Full Name
    parvin betaprovided by VGNC
    Primary source
    VGNC:VGNC:75606
    See related
    Ensembl:ENSMMUG00000015448
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PARVB in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (7316381..7453472, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (86181586..86318755)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene shisa like 1 Neighboring gene uncharacterized LOC114670342 Neighboring gene parvin gamma Neighboring gene microRNA mir-7205 Neighboring gene SAMM50 sorting and assembly machinery component Neighboring gene uncharacterized LOC107000684

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment or maintenance of cell polarity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lamellipodium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in substrate adhesion-dependent cell spreading IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in focal adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lamellipodium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-parvin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      7316381..7453472 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028827619.1 → XP_028683452.1  beta-parvin isoform X2

      UniProtKB/TrEMBL
      A0A5F8AIT6
      Related
      ENSMMUP00000076920.1, ENSMMUT00000083869.1
      Conserved Domains (2) summary
      cd21336
      Location:88 → 193
      CH_PARVB_rpt1; first calponin homology (CH) domain found in beta-parvin
      cl00030
      Location:235 → 330
      CH_SF; calponin homology (CH) domain superfamily

    2. XM_028827618.1 → XP_028683451.1  beta-parvin isoform X1

      UniProtKB/TrEMBL
      F6QBF0, H9FTJ0
      Related
      ENSMMUP00000036932.3, ENSMMUT00000043937.3
      Conserved Domains (2) summary
      cd21336
      Location:88 → 193
      CH_PARVB_rpt1; first calponin homology (CH) domain found in beta-parvin
      cd21338
      Location:235 → 364
      CH_PARVB_rpt2; second calponin homology (CH) domain found in beta-parvin

    3. XM_028827620.1 → XP_028683453.1  beta-parvin isoform X3

      Conserved Domains (1) summary
      pfam00307
      Location:27 → 134
      CH; Calponin homology (CH) domain

    RNA

    1. XR_003719836.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials