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    YIF1B Yip1 interacting factor homolog B, membrane trafficking protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 719551, updated on 17-Aug-2024

    Summary

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    Official Symbol
    YIF1Bprovided by VGNC
    Official Full Name
    Yip1 interacting factor homolog B, membrane trafficking proteinprovided by VGNC
    Primary source
    VGNC:VGNC:79852
    See related
    Ensembl:ENSMMUG00000028771
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See YIF1B in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (37547188..37559045, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (34029079..34041410, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene serine peptidase inhibitor, Kunitz type 2 Neighboring gene chromosome 19 C19orf33 homolog Neighboring gene potassium two pore domain channel subfamily K member 6 Neighboring gene cation channel sperm associated auxiliary subunit gamma

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in COPII-coated ER to Golgi transport vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum-Golgi intermediate compartment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein YIF1B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      37547188..37559045 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015123837.2 → XP_014979323.1  protein YIF1B isoform X2

      UniProtKB/TrEMBL
      F6XG22
      Related
      ENSMMUP00000031630.3, ENSMMUT00000038529.3
      Conserved Domains (1) summary
      pfam03878
      Location:72 → 306
      YIF1; YIF1

    2. XM_015123838.2 → XP_014979324.1  protein YIF1B isoform X3

      UniProtKB/TrEMBL
      F6XG22
      Conserved Domains (1) summary
      pfam03878
      Location:75 → 306
      YIF1; YIF1

    3. XM_015123836.2 → XP_014979322.1  protein YIF1B isoform X1

      UniProtKB/TrEMBL
      F6XG22
      Conserved Domains (1) summary
      pfam03878
      Location:75 → 309
      YIF1; YIF1

    4. XM_015123840.2 → XP_014979326.1  protein YIF1B isoform X5

      UniProtKB/TrEMBL
      G7NMX4
      Conserved Domains (1) summary
      pfam03878
      Location:44 → 277
      YIF1

    5. XM_015123839.2 → XP_014979325.1  protein YIF1B isoform X4

      UniProtKB/TrEMBL
      G7NMX4
      Conserved Domains (1) summary
      pfam03878
      Location:57 → 291
      YIF1; YIF1

    6. XM_015123842.2 → XP_014979328.1  protein YIF1B isoform X5

      UniProtKB/TrEMBL
      G7NMX4
      Conserved Domains (1) summary
      pfam03878
      Location:44 → 277
      YIF1

    7. XM_015123841.2 → XP_014979327.1  protein YIF1B isoform X5

      UniProtKB/TrEMBL
      G7NMX4
      Conserved Domains (1) summary
      pfam03878
      Location:44 → 277
      YIF1

    8. XM_028839582.1 → XP_028695415.1  protein YIF1B isoform X5

      UniProtKB/TrEMBL
      G7NMX4
      Conserved Domains (1) summary
      pfam03878
      Location:44 → 277
      YIF1
    Nucleotide Protein
    Heading Accession and Version

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