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    TOP6BL TOP6B like initiator of meiotic double strand breaks [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 721782, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TOP6BLprovided by VGNC
    Official Full Name
    TOP6B like initiator of meiotic double strand breaksprovided by VGNC
    Primary source
    VGNC:VGNC:100894
    See related
    Ensembl:ENSMMUG00000004529
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C14H11orf80
    Orthologs
    human mouse all
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    Genomic context

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    See TOP6BL in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (7698130..7802598, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (7567565..7673846, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene pyruvate carboxylase Neighboring gene leucine rich repeat and fibronectin type III domain containing 4 Neighboring gene Ras converting CAAX endopeptidase 1 Neighboring gene ferritin light chain pseudogene Neighboring gene complement component 1 Q subcomponent-binding protein, mitochondrial pseudogene Neighboring gene spectrin beta, non-erythrocytic 2 Neighboring gene RNA-binding protein 4B Neighboring gene RNA-binding protein 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in meiotic DNA double-strand break formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in reciprocal meiotic recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    type 2 DNA topoisomerase 6 subunit B-like
    Names
    chromosome 14 C11orf80 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      7698130..7802598 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833187.1 → XP_028689020.1  type 2 DNA topoisomerase 6 subunit B-like isoform X5

      Conserved Domains (1) summary
      pfam15091
      Location:120 → 526
      DUF4554; Domain of unknown function (DUF4554)

    2. XM_028833186.1 → XP_028689019.1  type 2 DNA topoisomerase 6 subunit B-like isoform X4

      Conserved Domains (1) summary
      pfam15091
      Location:120 → 527
      DUF4554; Domain of unknown function (DUF4554)

    3. XM_028833188.1 → XP_028689021.1  type 2 DNA topoisomerase 6 subunit B-like isoform X9

      Conserved Domains (1) summary
      pfam15091
      Location:120 → 549
      DUF4554; Domain of unknown function (DUF4554)

    4. XM_028833184.1 → XP_028689017.1  type 2 DNA topoisomerase 6 subunit B-like isoform X2

      Conserved Domains (1) summary
      pfam15091
      Location:120 → 550
      DUF4554; Domain of unknown function (DUF4554)

    5. XM_028833192.1 → XP_028689025.1  type 2 DNA topoisomerase 6 subunit B-like isoform X11

      Conserved Domains (1) summary
      pfam15091
      Location:120 → 464
      DUF4554; Domain of unknown function (DUF4554)

    6. XM_015113604.2 → XP_014969090.2  type 2 DNA topoisomerase 6 subunit B-like isoform X8

      Conserved Domains (1) summary
      pfam15091
      Location:120 → 550
      DUF4554; Domain of unknown function (DUF4554)

    7. XM_028833185.1 → XP_028689018.1  type 2 DNA topoisomerase 6 subunit B-like isoform X3

      Conserved Domains (1) summary
      pfam15091
      Location:120 → 550
      DUF4554; Domain of unknown function (DUF4554)

    8. XM_015113602.2 → XP_014969088.2  type 2 DNA topoisomerase 6 subunit B-like isoform X6

      Conserved Domains (1) summary
      pfam15091
      Location:120 → 551
      DUF4554; Domain of unknown function (DUF4554)

    9. XM_028833183.1 → XP_028689016.1  type 2 DNA topoisomerase 6 subunit B-like isoform X1

      Conserved Domains (1) summary
      pfam15091
      Location:120 → 551
      DUF4554; Domain of unknown function (DUF4554)

    10. XM_015113603.2 → XP_014969089.2  type 2 DNA topoisomerase 6 subunit B-like isoform X7

      Conserved Domains (1) summary
      pfam15091
      Location:120 → 550
      DUF4554; Domain of unknown function (DUF4554)

    11. XM_028833193.1 → XP_028689026.1  type 2 DNA topoisomerase 6 subunit B-like isoform X12

      Conserved Domains (1) summary
      pfam15091
      Location:1 → 432
      DUF4554; Domain of unknown function (DUF4554)

    12. XM_028833191.1 → XP_028689024.1  type 2 DNA topoisomerase 6 subunit B-like isoform X10

      Conserved Domains (1) summary
      pfam15091
      Location:54 → 485
      DUF4554; Domain of unknown function (DUF4554)

    13. XM_028833189.1 → XP_028689022.1  type 2 DNA topoisomerase 6 subunit B-like isoform X10

      Conserved Domains (1) summary
      pfam15091
      Location:54 → 485
      DUF4554; Domain of unknown function (DUF4554)

    14. XM_028833195.1 → XP_028689028.1  type 2 DNA topoisomerase 6 subunit B-like isoform X12

      Conserved Domains (1) summary
      pfam15091
      Location:1 → 432
      DUF4554; Domain of unknown function (DUF4554)

    15. XM_028833194.1 → XP_028689027.1  type 2 DNA topoisomerase 6 subunit B-like isoform X12

      Conserved Domains (1) summary
      pfam15091
      Location:1 → 432
      DUF4554; Domain of unknown function (DUF4554)

    RNA

    1. XR_001439350.2 RNA Sequence

      Related
      ENSMMUT00000044597.3
    Nucleotide Protein
    Heading Accession and Version

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