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    RIOX1 ribosomal oxygenase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696773, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RIOX1provided by VGNC
    Official Full Name
    ribosomal oxygenase 1provided by VGNC
    Primary source
    VGNC:VGNC:76787
    See related
    Ensembl:ENSMMUG00000000315
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C7H14orf169
    Orthologs
    human mouse all
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    Genomic context

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    See RIOX1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (135627866..135658643)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (135877280..135887704)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene NUMB endocytic adaptor protein Neighboring gene uncharacterized LOC114679597 Neighboring gene HEAT repeat containing 4 Neighboring gene nucleophosmin pseudogene Neighboring gene acyl-CoA thioesterase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone H3K36 demethylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone H3K4 demethylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66; ribosomal oxygenase 1
    Names
    lysine-specific demethylase NO66
    XP_001090820.1
    XP_028707490.1
    XP_028707491.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      135627866..135658643
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028851657.1 → XP_028707490.1  ribosomal oxygenase 1

      UniProtKB/TrEMBL
      F6YUZ8, H9ZDL1
      Conserved Domains (1) summary
      pfam08007
      Location:217 → 558
      Cupin_4; Cupin superfamily protein

    2. XM_028851658.1 → XP_028707491.1  ribosomal oxygenase 1

      UniProtKB/TrEMBL
      F6YUZ8, H9ZDL1
      Conserved Domains (1) summary
      pfam08007
      Location:217 → 558
      Cupin_4; Cupin superfamily protein

    3. XM_001090820.4 → XP_001090820.1  ribosomal oxygenase 1

      See identical proteins and their annotated locations for XP_001090820.1

      UniProtKB/TrEMBL
      F6YUZ8, H9ZDL1
      Related
      ENSMMUP00000000425.1, ENSMMUT00000000458.3
      Conserved Domains (1) summary
      pfam08007
      Location:217 → 558
      Cupin_4; Cupin superfamily protein
    Nucleotide Protein
    Heading Accession and Version

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