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    SNX9 sorting nexin 9 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706016, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SNX9provided by VGNC
    Official Full Name
    sorting nexin 9provided by VGNC
    Primary source
    VGNC:VGNC:77704
    See related
    Ensembl:ENSMMUG00000007142
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SNX9 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (64155931..64279880)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (108019810..108143712, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC114677529 Neighboring gene uncharacterized LOC114677530 Neighboring gene U7 small nuclear RNA Neighboring gene uncharacterized LOC106998068 Neighboring gene synaptojanin 2 Neighboring gene serine active site containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cleavage furrow formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endosomal transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cytokinesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in plasma membrane tubulation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorting nexin-9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      64155931..64279880
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001094343.4 → XP_001094343.2  sorting nexin-9 isoform X3

      UniProtKB/TrEMBL
      A0A5F8ANR0, G7MQ21
      Related
      ENSMMUP00000079020.1, ENSMMUT00000096873.1
      Conserved Domains (3) summary
      cd07285
      Location:243 → 368
      PX_SNX9; The phosphoinositide binding Phox Homology domain of Sorting Nexin 9
      cd07668
      Location:379 → 588
      BAR_SNX9; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 9
      cd11898
      Location:1 → 53
      SH3_SNX9; Src Homology 3 domain of Sorting nexin 9

    2. XM_028847289.1 → XP_028703122.1  sorting nexin-9 isoform X1

      UniProtKB/TrEMBL
      F7DMQ2, F7DMR9
      Related
      ENSMMUP00000009365.4, ENSMMUT00000009979.4
      Conserved Domains (3) summary
      cd07285
      Location:280 → 405
      PX_SNX9; The phosphoinositide binding Phox Homology domain of Sorting Nexin 9
      cd07668
      Location:416 → 625
      BAR_SNX9; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 9
      cd11898
      Location:4 → 60
      SH3_SNX9; Src Homology 3 domain of Sorting nexin 9

    3. XM_028847290.1 → XP_028703123.1  sorting nexin-9 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QX94, F7DMR9
      Related
      ENSMMUP00000052674.2, ENSMMUT00000054883.2
      Conserved Domains (3) summary
      cd07285
      Location:250 → 375
      PX_SNX9; The phosphoinositide binding Phox Homology domain of Sorting Nexin 9
      cd07668
      Location:386 → 595
      BAR_SNX9; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 9
      cd11898
      Location:4 → 60
      SH3_SNX9; Src Homology 3 domain of Sorting nexin 9
    Nucleotide Protein
    Heading Accession and Version

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