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    Mymk myomaker, myoblast fusion factor [ Mus musculus (house mouse) ]

    Gene ID: 66139, updated on 27-Nov-2024

    Summary

    Official Symbol
    Mymkprovided by MGI
    Official Full Name
    myomaker, myoblast fusion factorprovided by MGI
    Primary source
    MGI:MGI:1913389
    See related
    Ensembl:ENSMUSG00000009214 AllianceGenome:MGI:1913389
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tmem8c; myomaker; 1110002H13Rik
    Summary
    Involved in myoblast fusion; plasma membrane fusion; and positive regulation of skeletal muscle hypertrophy. Acts upstream of or within myoblast fusion involved in skeletal muscle regeneration. Located in Golgi membrane and plasma membrane. Is expressed in several structures, including alimentary system; limb; skeletal musculature; and somite. Human ortholog(s) of this gene implicated in Carey-Fineman-Ziter syndrome. Orthologous to human MYMK (myomaker, myoblast fusion factor). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in limb E14.5 (RPKM 15.9) and CNS E11.5 (RPKM 1.1) See more
    Orthologs
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    Genomic context

    See Mymk in Genome Data Viewer
    Location:
    2 A3; 2 19.21 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (26951648..26962173, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (27061636..27072161, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene ribosomal protein L6 pseudogene Neighboring gene predicted gene 13398 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:26934889-26935076 Neighboring gene ADAMTS-like 2 Neighboring gene predicted gene, 36882 Neighboring gene family with sequence similarity 163, member B Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:26977601-26977932 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:26981648-26981757

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General protein information

    Preferred Names
    protein myomaker
    Names
    myoblast fusion maker
    transmembrane protein 8C

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001159602.1NP_001153074.1  protein myomaker isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (2) has a shorter and distinct N-terminus compared to isoform 1.
      Source sequence(s)
      AK003298, BC062145, CX564956
      Consensus CDS
      CCDS50545.1
      UniProtKB/TrEMBL
      E9QA72
      Related
      ENSMUSP00000128491.2, ENSMUST00000163967.2
      Conserved Domains (1) summary
      pfam12036
      Location:4144
      DUF3522; Protein of unknown function (DUF3522)
    2. NM_025376.3NP_079652.1  protein myomaker isoform 1

      See identical proteins and their annotated locations for NP_079652.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
      Source sequence(s)
      AK003298, BB839715, BC062145
      Consensus CDS
      CCDS15823.1
      UniProtKB/Swiss-Prot
      Q9D1N4
      Related
      ENSMUSP00000009358.3, ENSMUST00000009358.9
      Conserved Domains (1) summary
      pfam12036
      Location:5185
      DUF3522; Protein of unknown function (DUF3522)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      26951648..26962173 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)