U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CRAT carnitine O-acetyltransferase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716908, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CRATprovided by VGNC
    Official Full Name
    carnitine O-acetyltransferaseprovided by VGNC
    Primary source
    VGNC:VGNC:71483
    See related
    Ensembl:ENSMMUG00000011767
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CRAT in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (11443917..11460152)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (9725616..9742181)

    Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106993600 Neighboring gene protein phosphatase 2 phosphatase activator Neighboring gene dolichyldiphosphatase 1 Neighboring gene U6 spliceosomal RNA Neighboring gene mitoguardin 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carnitine O-acetyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carnitine metabolic process, CoA-linked IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    carnitine O-acetyltransferase
    NP_001248042.1
    XP_014972090.1
    XP_014972091.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261113.2 → NP_001248042.1  carnitine O-acetyltransferase

      See identical proteins and their annotated locations for NP_001248042.1

      Status: PROVISIONAL

      Source sequence(s)
      JV044545
      UniProtKB/TrEMBL
      G7NFK5, I0FJJ0
      Related
      ENSMMUP00000071010.1, ENSMMUT00000087062.1
      Conserved Domains (1) summary
      pfam00755
      Location:35 → 615
      Carn_acyltransf; Choline/Carnitine o-acyltransferase

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041768.1 Reference Mmul_10 Primary Assembly

      Range
      11443917..11460152
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015116604.2 → XP_014972090.1  carnitine O-acetyltransferase isoform X1

      UniProtKB/TrEMBL
      F7HQL2, F7HQL4, G7NFK5
      Related
      ENSMMUP00000015454.4, ENSMMUT00000016495.4
      Conserved Domains (1) summary
      pfam00755
      Location:36 → 616
      Carn_acyltransf; Choline/Carnitine o-acyltransferase

    2. XM_015116605.2 → XP_014972091.1  carnitine O-acetyltransferase isoform X1

      UniProtKB/TrEMBL
      F7HQL2, F7HQL4, G7NFK5
      Related
      ENSMMUP00000015453.3, ENSMMUT00000016494.4
      Conserved Domains (1) summary
      pfam00755
      Location:36 → 616
      Carn_acyltransf; Choline/Carnitine o-acyltransferase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.