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    CHM CHM Rab escort protein [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694499, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CHMprovided by VGNC
    Official Full Name
    CHM Rab escort proteinprovided by VGNC
    Primary source
    VGNC:VGNC:71040
    Locus tag
    EGK_20703
    See related
    Ensembl:ENSMMUG00000016776
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CHM in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (82699353..82893258, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (79960148..80150696, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene 28S ribosomal protein S31, mitochondrial pseudogene Neighboring gene swi5-dependent recombination DNA repair protein 1 homolog pseudogene Neighboring gene microRNA mir-361 Neighboring gene stress-induced-phosphoprotein 1 pseudogene Neighboring gene histone deacetylase 1 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GDP-dissociation inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein geranylgeranylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in small GTPase-mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Rab-protein geranylgeranyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rab proteins geranylgeranyltransferase component A 1
    Names
    CHM, Rab escort protein 1
    Rab escort protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      82699353..82893258 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001083432.3 → XP_001083432.2  rab proteins geranylgeranyltransferase component A 1 isoform X2

      UniProtKB/TrEMBL
      A0A5S6R6V9, A0A8J8XWL3, F7DAV9, G7NSD9
      Related
      ENSMMUP00000022051.4, ENSMMUT00000023568.4
      Conserved Domains (2) summary
      pfam13450
      Location:13 → 54
      NAD_binding_8; NAD(P)-binding Rossmann-like domain
      cl21454
      Location:225 → 542
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    2. XM_028842241.1 → XP_028698074.1  rab proteins geranylgeranyltransferase component A 1 isoform X5

      Conserved Domains (1) summary
      cl21454
      Location:85 → 402
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    3. XM_015127760.2 → XP_014983246.2  rab proteins geranylgeranyltransferase component A 1 isoform X1

      Conserved Domains (1) summary
      cl21454
      Location:229 → 546
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    4. XM_028842246.1 → XP_028698079.1  rab proteins geranylgeranyltransferase component A 1 isoform X5

      Conserved Domains (1) summary
      cl21454
      Location:85 → 402
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    5. XM_028842245.1 → XP_028698078.1  rab proteins geranylgeranyltransferase component A 1 isoform X5

      Conserved Domains (1) summary
      cl21454
      Location:85 → 402
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    6. XM_028842244.1 → XP_028698077.1  rab proteins geranylgeranyltransferase component A 1 isoform X5

      Conserved Domains (1) summary
      cl21454
      Location:85 → 402
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    7. XM_028842243.1 → XP_028698076.1  rab proteins geranylgeranyltransferase component A 1 isoform X5

      Conserved Domains (1) summary
      cl21454
      Location:85 → 402
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    8. XM_028842242.1 → XP_028698075.1  rab proteins geranylgeranyltransferase component A 1 isoform X5

      Conserved Domains (1) summary
      cl21454
      Location:85 → 402
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    9. XM_028842240.1 → XP_028698073.1  rab proteins geranylgeranyltransferase component A 1 isoform X5

      Conserved Domains (1) summary
      cl21454
      Location:85 → 402
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    10. XM_028842237.1 → XP_028698070.1  rab proteins geranylgeranyltransferase component A 1 isoform X3

      Conserved Domains (1) summary
      cl21454
      Location:195 → 512
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    11. XM_028842239.1 → XP_028698072.1  rab proteins geranylgeranyltransferase component A 1 isoform X5

      Conserved Domains (1) summary
      cl21454
      Location:85 → 402
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    12. XM_028842238.1 → XP_028698071.1  rab proteins geranylgeranyltransferase component A 1 isoform X4

      Conserved Domains (1) summary
      cl21454
      Location:229 → 531
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version

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