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    AP1S2 adaptor related protein complex 1 subunit sigma 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713244, updated on 17-Aug-2024

    Summary

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    Official Symbol
    AP1S2provided by VGNC
    Official Full Name
    adaptor related protein complex 1 subunit sigma 2provided by VGNC
    Primary source
    VGNC:VGNC:69961
    Locus tag
    EGK_20292
    See related
    Ensembl:ENSMMUG00000014055
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See AP1S2 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (15524861..15553469, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (15143481..15172290, complement)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene carbonic anhydrase 5B Neighboring gene zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 Neighboring gene U5 spliceosomal RNA Neighboring gene gastrin releasing peptide receptor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables clathrin adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of AP-1 adaptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of membrane coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AP-1 complex subunit sigma-2
    Names
    adaptor related protein complex 1 sigma 2 subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194910.2 → NP_001181839.1  AP-1 complex subunit sigma-2

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02003165
      UniProtKB/TrEMBL
      A0A1D5Q914, A0A1D5QAR5
      Related
      ENSMMUP00000045133.2, ENSMMUT00000069631.2
      Conserved Domains (1) summary
      cd14831
      Location:2 → 143
      AP1_sigma; AP-1 complex subunit sigma

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      15524861..15553469 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001102167.4 → XP_001102167.1  AP-1 complex subunit sigma-2 isoform X3

      See identical proteins and their annotated locations for XP_001102167.1

      UniProtKB/TrEMBL
      A0A1D5Q914, A0A8J8YGB4, G7NSA9, H9EPJ6
      Related
      ENSMMUP00000059140.2, ENSMMUT00000070410.2
      Conserved Domains (1) summary
      cd14831
      Location:2 → 144
      AP1_sigma; AP-1 complex subunit sigma

    2. XM_015126960.2 → XP_014982446.1  AP-1 complex subunit sigma-2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q914, F7AGB8, H9G1E5
      Conserved Domains (1) summary
      cd14831
      Location:2 → 144
      AP1_sigma; AP-1 complex subunit sigma

    3. XM_028841826.1 → XP_028697659.1  AP-1 complex subunit sigma-2 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q914, F7AGB8, H9G1E5
      Related
      ENSMMUP00000018474.3, ENSMMUT00000019732.3
      Conserved Domains (1) summary
      cd14831
      Location:2 → 144
      AP1_sigma; AP-1 complex subunit sigma

    4. XM_015126962.2 → XP_014982448.1  AP-1 complex subunit sigma-2 isoform X4

      UniProtKB/TrEMBL
      A0A1D5Q914
      Conserved Domains (1) summary
      cd14831
      Location:2 → 142
      AP1_sigma; AP-1 complex subunit sigma

    5. XM_015126961.2 → XP_014982447.1  AP-1 complex subunit sigma-2 isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q914
      Conserved Domains (1) summary
      cd14831
      Location:2 → 144
      AP1_sigma; AP-1 complex subunit sigma

    RNA

    1. XR_001441911.2 RNA Sequence

    2. XR_001441912.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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