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    TPM3 tropomyosin 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716336, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TPM3provided by VGNC
    Official Full Name
    tropomyosin 3provided by VGNC
    Primary source
    VGNC:VGNC:78635
    See related
    Ensembl:ENSMMUG00000010805
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TPM3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (96866436..96903667)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (128762485..128793957, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 141 Neighboring gene microRNA mir-190b Neighboring gene nucleoporin 210 like Neighboring gene fukutin-like Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tropomyosin alpha-3 chain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257843.1 → NP_001244772.1  tropomyosin alpha-3 chain

      See identical proteins and their annotated locations for NP_001244772.1

      Status: PROVISIONAL

      Source sequence(s)
      JU320005
      UniProtKB/TrEMBL
      H9EN02
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      96866436..96903667
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028845531.1 → XP_028701364.1  tropomyosin alpha-3 chain isoform X8

      Conserved Domains (2) summary
      pfam00261
      Location:49 → 283
      Tropomyosin
      pfam16526
      Location:14 → 73
      CLZ; C-terminal leucine zipper domain of cyclic nucleotide-gated channels

    2. XM_028845511.1 → XP_028701344.1  tropomyosin alpha-3 chain isoform X4

      Conserved Domains (1) summary
      pfam00261
      Location:49 → 283
      Tropomyosin

    3. XM_028845524.1 → XP_028701357.1  tropomyosin alpha-3 chain isoform X6

      UniProtKB/TrEMBL
      F7GS35, F7GT94, G7MDT5
      Conserved Domains (1) summary
      pfam00261
      Location:49 → 283
      Tropomyosin

    4. XM_028845504.1 → XP_028701337.1  tropomyosin alpha-3 chain isoform X3

      Conserved Domains (1) summary
      pfam00261
      Location:49 → 283
      Tropomyosin

    5. XM_028845500.1 → XP_028701333.1  tropomyosin alpha-3 chain isoform X2

      Conserved Domains (2) summary
      pfam00261
      Location:49 → 283
      Tropomyosin
      pfam16526
      Location:14 → 73
      CLZ; C-terminal leucine zipper domain of cyclic nucleotide-gated channels

    6. XM_028845543.1 → XP_028701376.1  tropomyosin alpha-3 chain isoform X10

      Conserved Domains (1) summary
      pfam00261
      Location:49 → 282
      Tropomyosin

    7. XM_028845495.1 → XP_028701328.1  tropomyosin alpha-3 chain isoform X1

      UniProtKB/TrEMBL
      G7MDT5
      Conserved Domains (2) summary
      pfam00261
      Location:49 → 283
      Tropomyosin
      pfam16526
      Location:14 → 73
      CLZ; C-terminal leucine zipper domain of cyclic nucleotide-gated channels

    8. XM_028845537.1 → XP_028701370.1  tropomyosin alpha-3 chain isoform X9

      Conserved Domains (1) summary
      pfam00261
      Location:49 → 282
      Tropomyosin

    9. XM_028845526.1 → XP_028701359.1  tropomyosin alpha-3 chain isoform X7

      Conserved Domains (2) summary
      pfam00261
      Location:49 → 283
      Tropomyosin
      pfam16526
      Location:14 → 73
      CLZ; C-terminal leucine zipper domain of cyclic nucleotide-gated channels

    10. XM_028845519.1 → XP_028701352.1  tropomyosin alpha-3 chain isoform X5

      UniProtKB/TrEMBL
      F7GS35, F7GT94, G7MDT5
      Related
      ENSMMUP00000014158.3, ENSMMUT00000015107.4
      Conserved Domains (1) summary
      pfam00261
      Location:49 → 283
      Tropomyosin

    11. XM_015152664.2 → XP_015008150.1  tropomyosin alpha-3 chain isoform X16

      UniProtKB/TrEMBL
      F6VQX6
      Related
      ENSMMUP00000038940.2, ENSMMUT00000045900.3
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    12. XM_015152656.2 → XP_015008142.1  tropomyosin alpha-3 chain isoform X13

      UniProtKB/TrEMBL
      F6VQW8, H9EN00, I0FUQ7
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    13. XM_015152644.2 → XP_015008130.1  tropomyosin alpha-3 chain isoform X12

      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    14. XM_015152689.2 → XP_015008175.1  tropomyosin alpha-3 chain isoform X18

      Conserved Domains (1) summary
      pfam00261
      Location:12 → 245
      Tropomyosin

    15. XM_015152674.2 → XP_015008160.1  tropomyosin alpha-3 chain isoform X15

      UniProtKB/TrEMBL
      F6VQX6
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    16. XM_015152669.2 → XP_015008155.1  tropomyosin alpha-3 chain isoform X14

      UniProtKB/TrEMBL
      A0A5K1UXI5, H9EYX3
      Related
      ENSMMUP00000038941.3, ENSMMUT00000045901.3
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    17. XM_015152649.2 → XP_015008135.1  tropomyosin alpha-3 chain isoform X11

      UniProtKB/TrEMBL
      A0A1D5QKL3, F7GS38, H9EN01
      Related
      ENSMMUP00000048586.2, ENSMMUT00000071421.2
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    18. XM_015152696.2 → XP_015008182.1  tropomyosin alpha-3 chain isoform X17

      UniProtKB/TrEMBL
      A0A5K1VBZ1
      Related
      ENSMMUP00000065326.1, ENSMMUT00000083358.1
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 245
      Tropomyosin

    19. XM_015152707.1 → XP_015008193.1  tropomyosin alpha-3 chain isoform X20

      UniProtKB/TrEMBL
      A0A5F8A2J7
      Conserved Domains (1) summary
      pfam00261
      Location:22 → 180
      Tropomyosin

    20. XM_015152700.1 → XP_015008186.1  tropomyosin alpha-3 chain isoform X19

      UniProtKB/TrEMBL
      A0A5F8A2J7
      Related
      ENSMMUP00000071153.1, ENSMMUT00000101777.1
      Conserved Domains (1) summary
      pfam00261
      Location:1 → 156
      Tropomyosin
    Nucleotide Protein
    Heading Accession and Version

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