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    LRRTM4 leucine rich repeat transmembrane neuronal 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711411, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LRRTM4provided by VGNC
    Official Full Name
    leucine rich repeat transmembrane neuronal 4provided by VGNC
    Primary source
    VGNC:VGNC:106180
    See related
    Ensembl:ENSMMUG00000000181
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LRRTM4 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (31165415..31956154)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (77929652..78776649, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene cytochrome c-like Neighboring gene uncharacterized LOC114671927 Neighboring gene phosphoserine aminotransferase pseudogene Neighboring gene 40S ribosomal protein S4, X isoform-like Neighboring gene uncharacterized LOC114671825 Neighboring gene uncharacterized LOC114671929

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat transmembrane neuronal protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      31165415..31956154
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001112254.4 → XP_001112254.2  leucine-rich repeat transmembrane neuronal protein 4 isoform X1

      See identical proteins and their annotated locations for XP_001112254.2

      UniProtKB/TrEMBL
      G7NAG4
      Conserved Domains (4) summary
      cd00116
      Location:84 → 290
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00031
      Location:303 → 315
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:64 → 86
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:133 → 193
      LRR_8; Leucine rich repeat

    2. XM_028832350.1 → XP_028688183.1  leucine-rich repeat transmembrane neuronal protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A1D5R3W6, G7NAG4
      Related
      ENSMMUP00000055002.2, ENSMMUT00000078303.2
      Conserved Domains (4) summary
      COG4886
      Location:54 → 314
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00031
      Location:303 → 315
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:64 → 86
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:134 → 193
      LRR_8; Leucine rich repeat

    3. XM_028832351.1 → XP_028688184.1  leucine-rich repeat transmembrane neuronal protein 4 isoform X3

      UniProtKB/TrEMBL
      G7NAG4
      Conserved Domains (4) summary
      COG4886
      Location:54 → 314
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00031
      Location:303 → 315
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:64 → 86
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:134 → 193
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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