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    GTF3C1 general transcription factor IIIC subunit 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703998, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GTF3C1provided by VGNC
    Official Full Name
    general transcription factor IIIC subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:73316
    See related
    Ensembl:ENSMMUG00000008254
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GTF3C1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    37
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (25802599..25889143, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (26250353..26336805, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994981 Neighboring gene interleukin 4 receptor Neighboring gene interleukin 21 receptor Neighboring gene katanin interacting protein Neighboring gene U6 spliceosomal RNA Neighboring gene GSG1 like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in 5S class rRNA transcription by RNA polymerase III IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription initiation at RNA polymerase III promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription factor TFIIIC complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    general transcription factor 3C polypeptide 1
    Names
    general transcription factor IIIC, polypeptide 1, alpha 220kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      25802599..25889143 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028840741.1 → XP_028696574.1  general transcription factor 3C polypeptide 1 isoform X2

      UniProtKB/TrEMBL
      H9EVR1
      Conserved Domains (3) summary
      PRK07764
      Location:1743 → 1937
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      pfam04182
      Location:174 → 250
      B-block_TFIIIC; B-block binding subunit of TFIIIC
      cd16169
      Location:592 → 688
      Tau138_eWH; extended winged-helix domain of tau138 and related proteins

    2. XM_001101688.4 → XP_001101688.2  general transcription factor 3C polypeptide 1 isoform X1

      UniProtKB/TrEMBL
      H9EVR1
      Related
      ENSMMUP00000010814.3, ENSMMUT00000011535.4
      Conserved Domains (3) summary
      PRK07764
      Location:1762 → 1956
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      pfam04182
      Location:174 → 250
      B-block_TFIIIC; B-block binding subunit of TFIIIC
      cd16169
      Location:611 → 707
      Tau138_eWH; extended winged-helix domain of tau138 and related proteins
    Nucleotide Protein
    Heading Accession and Version

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