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    PEX13 peroxisomal biogenesis factor 13 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717886, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PEX13provided by VGNC
    Official Full Name
    peroxisomal biogenesis factor 13provided by VGNC
    Primary source
    VGNC:VGNC:75949
    Locus tag
    EGK_05358
    See related
    Ensembl:ENSMMUG00000005687
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PEX13 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (47756475..47790831, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (61825117..61859473)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106992970 Neighboring gene chromosome 13 C2orf74 homolog Neighboring gene chromobox protein homolog 3 pseudogene Neighboring gene SANT and BTB domain regulator of CSR Neighboring gene pseudouridine synthase 10 Neighboring gene non-POU domain-containing octamer-binding protein pseudogene Neighboring gene 40S ribosomal protein S12 pseudogene Neighboring gene U4 spliceosomal RNA Neighboring gene REL proto-oncogene, NF-kB subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein import into peroxisome matrix, docking IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of peroxisomal importomer complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in peroxisomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peroxisomal biogenesis factor 13
    Names
    peroxisome biogenesis factor 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001258170.1 → NP_001245099.1  peroxisomal biogenesis factor 13

      See identical proteins and their annotated locations for NP_001245099.1

      Status: PROVISIONAL

      Source sequence(s)
      JU473799
      UniProtKB/TrEMBL
      A0A5F8A2U8, A0A8J8YRF9, G7NA48, H9ER79
      Related
      ENSMMUP00000073329.1, ENSMMUT00000106337.1
      Conserved Domains (3) summary
      cd11864
      Location:276 → 333
      SH3_PEX13_eumet; Src Homology 3 domain of eumetazoan Peroxisomal biogenesis factor 13
      pfam04088
      Location:111 → 254
      Peroxin-13_N; Peroxin 13, N-terminal region
      pfam13389
      Location:31 → 109
      DUF4107; Protein of unknown function (DUF4107)

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      47756475..47790831 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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