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    TENT4A terminal nucleotidyltransferase 4A [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713853, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TENT4Aprovided by VGNC
    Official Full Name
    terminal nucleotidyltransferase 4Aprovided by VGNC
    Primary source
    VGNC:VGNC:78394
    Locus tag
    EGK_16348
    See related
    Ensembl:ENSMMUG00000013189
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    PAPD7
    Orthologs
    human mouse all
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    Genomic context

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    See TENT4A in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (6639937..6683469)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (6572803..6615050)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene NOP2/Sun RNA methyltransferase 2 Neighboring gene steroid 5 alpha-reductase 1 Neighboring gene uncharacterized LOC106998645 Neighboring gene uncharacterized LOC114678739 Neighboring gene uncharacterized LOC114678740

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables poly(A) RNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TRAMP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    terminal nucleotidyltransferase 4A
    Names
    DNA polymerase sigma
    poly(A) RNA polymerase D7, non-canonical
    NP_001248228.1
    XP_028705102.1
    XP_028705103.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261299.1 → NP_001248228.1  terminal nucleotidyltransferase 4A

      See identical proteins and their annotated locations for NP_001248228.1

      Status: PROVISIONAL

      Source sequence(s)
      JV046041
      UniProtKB/TrEMBL
      A0A8J8XUS5, G7MUM2, H9FP74, I2CT95
      Conserved Domains (2) summary
      cd05402
      Location:10 → 121
      NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases
      pfam03828
      Location:178 → 238
      PAP_assoc; Cid1 family poly A polymerase

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      6639937..6683469
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028849269.1 → XP_028705102.1  terminal nucleotidyltransferase 4A isoform X1

      UniProtKB/TrEMBL
      A0A5F8A3Q4, F6XQ15
      Related
      ENSMMUP00000017325.4, ENSMMUT00000018501.4
      Conserved Domains (1) summary
      COG5260
      Location:239 → 544
      TRF4; DNA polymerase sigma [Replication, recombination and repair]

    2. XM_028849270.1 → XP_028705103.1  terminal nucleotidyltransferase 4A isoform X2

      UniProtKB/TrEMBL
      A0A5F8A3Q4
      Conserved Domains (2) summary
      COG5260
      Location:239 → 544
      TRF4; DNA polymerase sigma [Replication, recombination and repair]
      cl40450
      Location:627 → 728
      KLF8_12_N; N-terminal domain of Kruppel-like factor (KLF) 8, KLF12, and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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