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    TNIP1 TNFAIP3 interacting protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713124, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TNIP1provided by VGNC
    Official Full Name
    TNFAIP3 interacting protein 1provided by VGNC
    Primary source
    VGNC:VGNC:79057
    See related
    Ensembl:ENSMMUG00000021051
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TNIP1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (148477653..148535044, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (149118733..149176122, complement)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 300 Neighboring gene glutathione peroxidase 3 Neighboring gene annexin A6 Neighboring gene coiled-coil domain containing 69

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cellular response to lipopolysaccharide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of canonical NF-kappaB signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TNFAIP3-interacting protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      148477653..148535044 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002804583.3 → XP_002804629.1  TNFAIP3-interacting protein 1 isoform X3

      See identical proteins and their annotated locations for XP_002804629.1

      UniProtKB/TrEMBL
      F7H1Z0
      Related
      ENSMMUP00000027704.4, ENSMMUT00000029604.4
      Conserved Domains (5) summary
      pfam15619
      Location:335 → 508
      Lebercilin; Ciliary protein causing Leber congenital amaurosis disease
      cd16269
      Location:368 → 380
      GBP_C; coiled coil [structural motif]
      cl15254
      Location:453 → 501
      UBAN; polyubiquitin binding domain of NEMO and related proteins
      cl19252
      Location:215 → 252
      MreC; rod shape-determining protein MreC
      cl20817
      Location:299 → 400
      GBP_C; Guanylate-binding protein, C-terminal domain

    2. XM_015141244.2 → XP_014996730.2  TNFAIP3-interacting protein 1 isoform X2

      UniProtKB/TrEMBL
      F6TPL4, F7H1Z0, H9Z483
      Related
      ENSMMUP00000033836.3, ENSMMUT00000040811.3
      Conserved Domains (1) summary
      COG1196
      Location:214 → 518
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    3. XM_015141245.2 → XP_014996731.1  TNFAIP3-interacting protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A5F8A6I2, F7H1Z0
      Related
      ENSMMUP00000072978.1, ENSMMUT00000080838.1
      Conserved Domains (4) summary
      cd16269
      Location:368 → 380
      GBP_C; coiled coil [structural motif]
      cl15254
      Location:453 → 501
      UBAN; polyubiquitin binding domain of NEMO and related proteins
      cl19252
      Location:215 → 252
      MreC; rod shape-determining protein MreC
      cl20817
      Location:299 → 400
      GBP_C; Guanylate-binding protein, C-terminal domain

    4. XM_001109428.4 → XP_001109428.1  TNFAIP3-interacting protein 1 isoform X3

      See identical proteins and their annotated locations for XP_001109428.1

      UniProtKB/TrEMBL
      F7H1Z0
      Conserved Domains (5) summary
      pfam15619
      Location:335 → 508
      Lebercilin; Ciliary protein causing Leber congenital amaurosis disease
      cd16269
      Location:368 → 380
      GBP_C; coiled coil [structural motif]
      cl15254
      Location:453 → 501
      UBAN; polyubiquitin binding domain of NEMO and related proteins
      cl19252
      Location:215 → 252
      MreC; rod shape-determining protein MreC
      cl20817
      Location:299 → 400
      GBP_C; Guanylate-binding protein, C-terminal domain

    5. XM_015141243.2 → XP_014996729.2  TNFAIP3-interacting protein 1 isoform X2

      UniProtKB/TrEMBL
      F6TPL4, F7H1Z0, H9Z483
      Conserved Domains (1) summary
      COG1196
      Location:214 → 518
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    6. XM_001109469.4 → XP_001109469.3  TNFAIP3-interacting protein 1 isoform X7

      UniProtKB/TrEMBL
      F7H1Z0
      Conserved Domains (1) summary
      COG1196
      Location:161 → 465
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    7. XM_015141246.2 → XP_014996732.1  TNFAIP3-interacting protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A5F8A6I2, F7H1Z0
      Conserved Domains (4) summary
      cd16269
      Location:368 → 380
      GBP_C; coiled coil [structural motif]
      cl15254
      Location:453 → 501
      UBAN; polyubiquitin binding domain of NEMO and related proteins
      cl19252
      Location:215 → 252
      MreC; rod shape-determining protein MreC
      cl20817
      Location:299 → 400
      GBP_C; Guanylate-binding protein, C-terminal domain

    8. XM_028849838.1 → XP_028705671.1  TNFAIP3-interacting protein 1 isoform X1

      UniProtKB/TrEMBL
      F7H1Z0
      Related
      ENSMMUP00000043187.2, ENSMMUT00000071963.2
      Conserved Domains (1) summary
      COG1196
      Location:214 → 518
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    9. XM_028849841.1 → XP_028705674.1  TNFAIP3-interacting protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A1D5R703, F7H1Z0
      Related
      ENSMMUP00000056091.2, ENSMMUT00000053824.2
      Conserved Domains (1) summary
      COG1196
      Location:161 → 465
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    10. XM_028849842.1 → XP_028705675.1  TNFAIP3-interacting protein 1 isoform X8

      UniProtKB/TrEMBL
      F7H1Z0
      Conserved Domains (1) summary
      COG1196
      Location:161 → 465
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    11. XM_028849839.1 → XP_028705672.1  TNFAIP3-interacting protein 1 isoform X1

      UniProtKB/TrEMBL
      F7H1Z0
      Conserved Domains (1) summary
      COG1196
      Location:214 → 518
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    12. XM_028849840.1 → XP_028705673.1  TNFAIP3-interacting protein 1 isoform X5

      UniProtKB/TrEMBL
      F7H1Z0
      Conserved Domains (1) summary
      COG1196
      Location:161 → 465
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version

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