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    PQBP1 polyglutamine binding protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711678, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PQBP1provided by VGNC
    Official Full Name
    polyglutamine binding protein 1provided by VGNC
    Primary source
    VGNC:VGNC:76388
    Locus tag
    EGK_20474
    See related
    Ensembl:ENSMMUG00000004548
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PQBP1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (48887190..48893292)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (49132314..49138492)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene ES cell expressed Ras Neighboring gene proprotein convertase subtilisin/kexin type 1 inhibitor Neighboring gene translocase of inner mitochondrial membrane 17B Neighboring gene solute carrier family 35 member A2 Neighboring gene Pim-2 proto-oncogene, serine/threonine kinase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribonucleoprotein complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polyglutamine-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194258.1 → NP_001181187.1  polyglutamine-binding protein 1

      See identical proteins and their annotated locations for NP_001181187.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02003165
      UniProtKB/TrEMBL
      A0A8J8YD28, F6S521, G7NR80, H9FNE3, H9Z3Z0
      Related
      ENSMMUP00000006050.4, ENSMMUT00000006436.4
      Conserved Domains (1) summary
      smart00456
      Location:47 → 78
      WW; Domain with 2 conserved Trp (W) residues

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      48887190..48893292
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015127331.2 → XP_014982817.1  polyglutamine-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      F6S5L8, H9FNE3
      Related
      ENSMMUP00000006049.3, ENSMMUT00000006435.4
      Conserved Domains (1) summary
      smart00456
      Location:68 → 99
      WW; Domain with 2 conserved Trp (W) residues

    2. XM_015127332.2 → XP_014982818.1  polyglutamine-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8J8YD28, F6S521, G7NR80, H9FNE3, H9Z3Z0
      Related
      ENSMMUP00000068243.1, ENSMMUT00000100884.1
      Conserved Domains (1) summary
      smart00456
      Location:47 → 78
      WW; Domain with 2 conserved Trp (W) residues

    3. XM_015127333.2 → XP_014982819.1  polyglutamine-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8J8YD28, F6S521, G7NR80, H9FNE3, H9Z3Z0
      Conserved Domains (1) summary
      smart00456
      Location:47 → 78
      WW; Domain with 2 conserved Trp (W) residues

    4. XM_015127334.2 → XP_014982820.1  polyglutamine-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8J8YD28, F6S521, G7NR80, H9FNE3, H9Z3Z0
      Conserved Domains (1) summary
      smart00456
      Location:47 → 78
      WW; Domain with 2 conserved Trp (W) residues

    5. XM_015127330.2 → XP_014982816.1  polyglutamine-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      H9FNE3
      Conserved Domains (1) summary
      smart00456
      Location:87 → 118
      WW; Domain with 2 conserved Trp (W) residues
    Nucleotide Protein
    Heading Accession and Version

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