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    PHC3 polyhomeotic homolog 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696744, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PHC3provided by VGNC
    Official Full Name
    polyhomeotic homolog 3provided by VGNC
    Primary source
    VGNC:VGNC:75804
    Locus tag
    EGK_11911
    See related
    Ensembl:ENSMMUG00000022199
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PHC3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (75025871..75120218, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (123610656..123744364)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676294 Neighboring gene N-lysine methyltransferase KMT5A pseudogene Neighboring gene U4 spliceosomal RNA Neighboring gene G protein-coupled receptor 160 Neighboring gene U6 spliceosomal RNA Neighboring gene U7 small nuclear RNA Neighboring gene protein kinase C iota Neighboring gene SKI like proto-oncogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of PRC1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polyhomeotic-like protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      75025871..75120218 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001090096.4 → XP_001090096.3  polyhomeotic-like protein 3 isoform X3

      UniProtKB/TrEMBL
      F6ZGN2, H9ZDR9
      Related
      ENSMMUP00000061673.1, ENSMMUT00000101678.1
      Conserved Domains (2) summary
      cd09577
      Location:926 → 994
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      smart00454
      Location:928 → 995
      SAM; Sterile alpha motif

    2. XM_015131638.2 → XP_014987124.1  polyhomeotic-like protein 3 isoform X5

      UniProtKB/TrEMBL
      F6ZGN2, G7MJB4
      Conserved Domains (2) summary
      cd09577
      Location:914 → 982
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      pfam09770
      Location:346 → 506
      PAT1; Topoisomerase II-associated protein PAT1

    3. XM_015131637.2 → XP_014987123.1  polyhomeotic-like protein 3 isoform X4

      UniProtKB/TrEMBL
      A0A1D5QB94, F6ZGN2
      Related
      ENSMMUP00000045312.2, ENSMMUT00000061563.2
      Conserved Domains (2) summary
      cd09577
      Location:916 → 984
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      pfam09770
      Location:332 → 492
      PAT1; Topoisomerase II-associated protein PAT1

    4. XM_015131641.2 → XP_014987127.1  polyhomeotic-like protein 3 isoform X11

      UniProtKB/TrEMBL
      A0A5F7ZWX2, F6ZGN2
      Related
      ENSMMUP00000070123.1, ENSMMUT00000099982.1
      Conserved Domains (2) summary
      cd09577
      Location:856 → 924
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      smart00454
      Location:858 → 925
      SAM; Sterile alpha motif

    5. XM_015131640.2 → XP_014987126.1  polyhomeotic-like protein 3 isoform X9

      UniProtKB/TrEMBL
      F6ZGN2
      Conserved Domains (2) summary
      cd09577
      Location:889 → 957
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      smart00454
      Location:891 → 958
      SAM; Sterile alpha motif

    6. XM_028843844.1 → XP_028699677.1  polyhomeotic-like protein 3 isoform X8

      UniProtKB/TrEMBL
      F6ZGN2
      Conserved Domains (3) summary
      cd09577
      Location:893 → 961
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      pfam09770
      Location:322 → 485
      PAT1; Topoisomerase II-associated protein PAT1
      pfam03154
      Location:173 → 545
      Atrophin-1; Atrophin-1 family

    7. XM_028843842.1 → XP_028699675.1  polyhomeotic-like protein 3 isoform X6

      UniProtKB/TrEMBL
      A0A1D5R151, F6ZGN2
      Related
      ENSMMUP00000054035.2, ENSMMUT00000058113.2
      Conserved Domains (3) summary
      cd09577
      Location:909 → 977
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      pfam09770
      Location:322 → 485
      PAT1; Topoisomerase II-associated protein PAT1
      pfam03154
      Location:173 → 502
      Atrophin-1; Atrophin-1 family

    8. XM_015131634.2 → XP_014987120.1  polyhomeotic-like protein 3 isoform X1

      UniProtKB/TrEMBL
      F6ZGN2
      Related
      ENSMMUP00000049268.2, ENSMMUT00000075353.2
      Conserved Domains (2) summary
      cd09577
      Location:942 → 1010
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      smart00454
      Location:944 → 1011
      SAM; Sterile alpha motif

    9. XM_028843847.1 → XP_028699680.1  polyhomeotic-like protein 3 isoform X12

      UniProtKB/TrEMBL
      F6ZGN2
      Conserved Domains (3) summary
      cd09577
      Location:844 → 912
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      pfam09770
      Location:257 → 420
      PAT1; Topoisomerase II-associated protein PAT1
      pfam03154
      Location:109 → 437
      Atrophin-1; Atrophin-1 family

    10. XM_028843845.1 → XP_028699678.1  polyhomeotic-like protein 3 isoform X10

      UniProtKB/TrEMBL
      A0A1D5R475
      Conserved Domains (2) summary
      cd09577
      Location:877 → 945
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      pfam09770
      Location:290 → 453
      PAT1; Topoisomerase II-associated protein PAT1

    11. XM_015131635.2 → XP_014987121.1  polyhomeotic-like protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A1D5R475
      Conserved Domains (2) summary
      cd09577
      Location:930 → 998
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      pfam09770
      Location:346 → 506
      PAT1; Topoisomerase II-associated protein PAT1

    12. XM_028843843.1 → XP_028699676.1  polyhomeotic-like protein 3 isoform X7

      UniProtKB/TrEMBL
      A0A1D5R475
      Conserved Domains (2) summary
      cd09577
      Location:904 → 972
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      pfam09770
      Location:317 → 480
      PAT1; Topoisomerase II-associated protein PAT1

    13. XM_015131636.2 → XP_014987122.1  polyhomeotic-like protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A1D5R475
      Conserved Domains (2) summary
      cd09577
      Location:930 → 998
      SAM_Ph1,2,3; SAM domain of Ph (polyhomeotic) proteins of Polycomb group
      pfam09770
      Location:346 → 506
      PAT1; Topoisomerase II-associated protein PAT1

    14. XM_015131643.2 → XP_014987129.1  polyhomeotic-like protein 3 isoform X14

      UniProtKB/TrEMBL
      A0A5F8AKU1
      Conserved Domains (1) summary
      pfam09770
      Location:370 → 465
      PAT1; Topoisomerase II-associated protein PAT1

    15. XM_015131642.2 → XP_014987128.1  polyhomeotic-like protein 3 isoform X13

      UniProtKB/TrEMBL
      A0A1D5R475
      Related
      ENSMMUP00000055111.2, ENSMMUT00000056117.2
      Conserved Domains (1) summary
      pfam09770
      Location:423 → 518
      PAT1; Topoisomerase II-associated protein PAT1

    RNA

    1. XR_001443110.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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