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    OTOP1 otopetrin 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 712780, updated on 17-Aug-2024

    Summary

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    Official Symbol
    OTOP1provided by VGNC
    Official Full Name
    otopetrin 1provided by VGNC
    Primary source
    VGNC:VGNC:75653
    See related
    Ensembl:ENSMMUG00000002782
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See OTOP1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (8763163..8800547)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (4380478..4417860, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene SH3 domain and tetratricopeptide repeat-containing protein 1 pseudogene Neighboring gene transmembrane protein 128 Neighboring gene dopamine receptor D5 Neighboring gene solute carrier family 2 member 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables proton channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in inner ear morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    otopetrin-1; proton channel OTOP1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      8763163..8800547
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001097009.4 → XP_001097009.2  proton channel OTOP1

      UniProtKB/TrEMBL
      F7H288, G7MSK2
      Related
      ENSMMUP00000003728.4, ENSMMUT00000003946.4
      Conserved Domains (1) summary
      pfam03189
      Location:133 → 596
      Otopetrin
    Nucleotide Protein
    Heading Accession and Version

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