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    SAGE1 sarcoma antigen 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 710060, updated on 5-Mar-2024

    Summary

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    Gene symbol
    SAGE1
    Gene description
    sarcoma antigen 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human all
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    Genomic context

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    See SAGE1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) X NC_041774.1 (131958655..131976207)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) X NC_027913.1 (129673524..129689502)

    Chromosome X - NC_041774.1Genomic Context describing neighboring genes Neighboring gene sarcoma antigen 1-like Neighboring gene uncharacterized LOC114674646 Neighboring gene cancer/testis antigen family 45 member A10-like Neighboring gene cancer/testis antigen family 45 member A2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in snRNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of integrator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sarcoma antigen 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041774.1 Reference Mmul_10 Primary Assembly

      Range
      131958655..131976207
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028841844.1 → XP_028697677.1  sarcoma antigen 1 isoform X5

      Conserved Domains (1) summary
      pfam15300
      Location:670 → 731
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    2. XM_028841840.1 → XP_028697673.1  sarcoma antigen 1 isoform X1

      Conserved Domains (1) summary
      pfam15300
      Location:741 → 802
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    3. XM_028841841.1 → XP_028697674.1  sarcoma antigen 1 isoform X2

      Conserved Domains (1) summary
      pfam15300
      Location:739 → 800
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    4. XM_028841843.1 → XP_028697676.1  sarcoma antigen 1 isoform X4

      UniProtKB/TrEMBL
      A0A5F8APL1, F7F1X6, F7F5N7
      Conserved Domains (1) summary
      pfam15300
      Location:693 → 754
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    5. XM_028841845.1 → XP_028697678.1  sarcoma antigen 1 isoform X6

      UniProtKB/TrEMBL
      A0A5F8APL1, F7F1X6, F7F5N7
      Conserved Domains (1) summary
      pfam15300
      Location:599 → 660
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    6. XM_028841842.1 → XP_028697675.1  sarcoma antigen 1 isoform X3

      Conserved Domains (1) summary
      pfam15300
      Location:736 → 797
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus
    Nucleotide Protein
    Heading Accession and Version

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