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    SPNS2 SPNS lysolipid transporter 2, sphingosine-1-phosphate [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 721549, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SPNS2provided by VGNC
    Official Full Name
    SPNS lysolipid transporter 2, sphingosine-1-phosphateprovided by VGNC
    Primary source
    VGNC:VGNC:78003
    See related
    Ensembl:ENSMMUG00000022858
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SPNS2 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (4318550..4360707)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (4404343..4446562)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 G1 Neighboring gene major facilitator superfamily domain-containing protein 1 pseudogene Neighboring gene SPNS lysolipid transporter 3, sphingosine-1-phosphate (putative) Neighboring gene uncharacterized LOC106993865 Neighboring gene MYB binding protein 1a Neighboring gene thioredoxin pseudogene Neighboring gene gamma-glutamyltransferase 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sphingolipid transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sphingosine-1-phosphate receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein spinster homolog 2
    Names
    sphingolipid transporter 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      4318550..4360707
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015118325.2 → XP_014973811.1  protein spinster homolog 2 isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZI39, H9F7Y8
      Related
      ENSMMUP00000064845.1, ENSMMUT00000090984.1
      Conserved Domains (2) summary
      cd06174
      Location:106 → 486
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:108 → 469
      MFS_1; Major Facilitator Superfamily

    2. XM_028835906.1 → XP_028691739.1  protein spinster homolog 2 isoform X1

      Conserved Domains (1) summary
      cd17328
      Location:106 → 520
      MFS_spinster_like; Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters

    3. XM_028835907.1 → XP_028691740.1  protein spinster homolog 2 isoform X2

      Conserved Domains (1) summary
      cd17328
      Location:106 → 498
      MFS_spinster_like; Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters

    4. XM_028835908.1 → XP_028691741.1  protein spinster homolog 2 isoform X4

      UniProtKB/TrEMBL
      H9F7Y8
      Related
      ENSMMUP00000030103.4, ENSMMUT00000032177.4
      Conserved Domains (1) summary
      cd17328
      Location:106 → 520
      MFS_spinster_like; Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters

    RNA

    1. XR_003723590.1 RNA Sequence

    2. XR_003723588.1 RNA Sequence

    3. XR_003723591.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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