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    TRPC3 transient receptor potential cation channel subfamily C member 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707586, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TRPC3provided by VGNC
    Official Full Name
    transient receptor potential cation channel subfamily C member 3provided by VGNC
    Primary source
    VGNC:VGNC:78652
    See related
    Ensembl:ENSMMUG00000009820
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TRPC3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (119715972..119791219, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (120760193..120897890, complement)

    Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene exosome component 9 Neighboring gene cyclin A2 Neighboring gene Bardet-Biedl syndrome 7 Neighboring gene uncharacterized LOC106998450 Neighboring gene signal peptidase complex subunit 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables inositol 1,4,5 trisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables store-operated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in manganese ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cytosolic calcium ion concentration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cation channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    short transient receptor potential channel 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041758.1 Reference Mmul_10 Primary Assembly

      Range
      119715972..119791219 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028848751.1 → XP_028704584.1  short transient receptor potential channel 3 isoform X2

      UniProtKB/TrEMBL
      G7MRW9
      Conserved Domains (2) summary
      TIGR00870
      Location:96 → 905
      trp; transient-receptor-potential calcium channel protein
      sd00045
      Location:146 → 177
      ANK; ANK repeat [structural motif]

    2. XM_015139158.2 → XP_014994644.1  short transient receptor potential channel 3 isoform X1

      UniProtKB/TrEMBL
      G7MRW9
      Conserved Domains (4) summary
      cd00204
      Location:119 → 253
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      TIGR00870
      Location:96 → 906
      trp; transient-receptor-potential calcium channel protein
      pfam08344
      Location:267 → 326
      TRP_2; Transient receptor ion channel II
      sd00045
      Location:146 → 177
      ANK; ANK repeat [structural motif]

    3. XM_015139159.2 → XP_014994645.1  short transient receptor potential channel 3 isoform X5

      UniProtKB/TrEMBL
      A0A1D5R929, G7MRW9
      Related
      ENSMMUP00000056820.2, ENSMMUT00000071586.2
      Conserved Domains (4) summary
      cd00204
      Location:119 → 253
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      TIGR00870
      Location:96 → 862
      trp; transient-receptor-potential calcium channel protein
      pfam08344
      Location:267 → 326
      TRP_2; Transient receptor ion channel II
      sd00045
      Location:146 → 177
      ANK; ANK repeat [structural motif]

    4. XM_028848752.1 → XP_028704585.1  short transient receptor potential channel 3 isoform X4

      UniProtKB/TrEMBL
      G7MRW9
      Conserved Domains (2) summary
      TIGR00870
      Location:96 → 889
      trp; transient-receptor-potential calcium channel protein
      sd00045
      Location:146 → 177
      ANK; ANK repeat [structural motif]

    5. XM_002808420.3 → XP_002808466.2  short transient receptor potential channel 3 isoform X3

      UniProtKB/TrEMBL
      F7H6Q8, G7MRW9
      Related
      ENSMMUP00000034842.3, ENSMMUT00000041834.3
      Conserved Domains (4) summary
      cd00204
      Location:119 → 253
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      TIGR00870
      Location:96 → 890
      trp; transient-receptor-potential calcium channel protein
      pfam08344
      Location:267 → 326
      TRP_2; Transient receptor ion channel II
      sd00045
      Location:146 → 177
      ANK; ANK repeat [structural motif]

    6. XM_028848753.1 → XP_028704586.1  short transient receptor potential channel 3 isoform X7

      UniProtKB/TrEMBL
      G7MRW9
      Conserved Domains (2) summary
      TIGR00870
      Location:23 → 833
      trp; transient-receptor-potential calcium channel protein
      sd00045
      Location:73 → 104
      ANK; ANK repeat [structural motif]

    7. XM_015139160.2 → XP_014994646.1  short transient receptor potential channel 3 isoform X6

      UniProtKB/TrEMBL
      G7MRW9
      Conserved Domains (4) summary
      cd00204
      Location:119 → 253
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      TIGR00870
      Location:96 → 861
      trp; transient-receptor-potential calcium channel protein
      pfam08344
      Location:267 → 326
      TRP_2; Transient receptor ion channel II
      sd00045
      Location:146 → 177
      ANK; ANK repeat [structural motif]

    8. XM_015139162.2 → XP_014994648.1  short transient receptor potential channel 3 isoform X8

      UniProtKB/TrEMBL
      G7MRW9
      Conserved Domains (4) summary
      cd00204
      Location:119 → 253
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      TIGR00870
      Location:96 → 821
      trp; transient-receptor-potential calcium channel protein
      pfam08344
      Location:267 → 326
      TRP_2; Transient receptor ion channel II
      sd00045
      Location:146 → 177
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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