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    RPGRIP1 RPGR interacting protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707961, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RPGRIP1provided by VGNC
    Official Full Name
    RPGR interacting protein 1provided by VGNC
    Primary source
    VGNC:VGNC:77007
    See related
    Ensembl:ENSMMUG00000021552
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RPGRIP1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (83188904..83252520)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (82535130..82597499)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein C Neighboring gene U4 spliceosomal RNA Neighboring gene SPT16 homolog, facilitates chromatin remodeling subunit Neighboring gene small nucleolar RNA U6-53/MBII-28 Neighboring gene chromodomain helicase DNA binding protein 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables thromboxane A2 receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in non-motile cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retinal rod cell development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in photoreceptor connecting cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
    Names
    retinitis pigmentosa GTPase regulator interacting protein 1
    x-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      83188904..83252520
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028851389.1 → XP_028707222.1  X-linked retinitis pigmentosa GTPase regulator-interacting protein 1

      UniProtKB/TrEMBL
      F7GN10
      Related
      ENSMMUP00000033138.3, ENSMMUT00000040067.3
      Conserved Domains (3) summary
      cd00030
      Location:740 → 847
      C2; C2 domain
      TIGR02168
      Location:193 → 514
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam11618
      Location:558 → 695
      C2-C2_1; First C2 domain of RPGR-interacting protein 1
    Nucleotide Protein
    Heading Accession and Version

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