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    LSG1 large 60S subunit nuclear export GTPase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708114, updated on 17-Aug-2024

    Summary

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    Official Symbol
    LSG1provided by VGNC
    Official Full Name
    large 60S subunit nuclear export GTPase 1provided by VGNC
    Primary source
    VGNC:VGNC:74360
    See related
    Ensembl:ENSMMUG00000010708
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See LSG1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (3280975..3313552)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (201438642..201470978, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene protein FAM151A-like Neighboring gene family with sequence similarity 43 member A Neighboring gene transmembrane protein 44 Neighboring gene uncharacterized LOC114676199

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ribosomal subunit export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    large subunit GTPase 1 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      3280975..3313552
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015132543.2 → XP_014988029.1  large subunit GTPase 1 homolog isoform X1

      UniProtKB/TrEMBL
      H9Z2S5
      Related
      ENSMMUP00000067661.1, ENSMMUT00000104764.1
      Conserved Domains (2) summary
      cd01857
      Location:222 → 503
      HSR1_MMR1; A circularly permuted subfamily of the Ras GTPases
      COG1161
      Location:210 → 613
      RbgA; Ribosome biogenesis GTPase A [Translation, ribosomal structure and biogenesis]

    2. XM_015132544.2 → XP_014988030.1  large subunit GTPase 1 homolog isoform X3

      UniProtKB/TrEMBL
      H9Z2S5
      Conserved Domains (2) summary
      cd01857
      Location:222 → 503
      HSR1_MMR1; A circularly permuted subfamily of the Ras GTPases
      COG1161
      Location:210 → 600
      RbgA; Ribosome biogenesis GTPase A [Translation, ribosomal structure and biogenesis]

    3. XM_028843554.1 → XP_028699387.1  large subunit GTPase 1 homolog isoform X4

      UniProtKB/TrEMBL
      H9Z2S5, I0FKM7
      Conserved Domains (2) summary
      cd01857
      Location:222 → 503
      HSR1_MMR1; A circularly permuted subfamily of the Ras GTPases
      COG1161
      Location:210 → 601
      RbgA; Ribosome biogenesis GTPase A [Translation, ribosomal structure and biogenesis]

    4. XM_028843552.1 → XP_028699385.1  large subunit GTPase 1 homolog isoform X2

    5. XM_028843553.1 → XP_028699386.1  large subunit GTPase 1 homolog isoform X2

    6. XM_028843551.1 → XP_028699384.1  large subunit GTPase 1 homolog isoform X2

    Nucleotide Protein
    Heading Accession and Version

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