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    SF3A1 splicing factor 3a subunit 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715552, updated on 17-Aug-2024

    Summary

    Official Symbol
    SF3A1provided by VGNC
    Official Full Name
    splicing factor 3a subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:77177
    Locus tag
    EGK_02932
    See related
    Ensembl:ENSMMUG00000005547
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
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    Genomic context

    See SF3A1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (21188825..21212279)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (72171772..72195214, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 215 Neighboring gene coiled-coil domain containing 157 Neighboring gene TBC1 domain family member 10A Neighboring gene cytosolic arginine sensor for mTORC1 subunit 1

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in mRNA cis splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in regulation of alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of U2 snRNP IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of U2-type prespliceosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    splicing factor 3A subunit 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001257699.1NP_001244628.1  splicing factor 3A subunit 1

      See identical proteins and their annotated locations for NP_001244628.1

      Status: PROVISIONAL

      Source sequence(s)
      JU320754
      UniProtKB/TrEMBL
      A0A8J8YIF7, F6T8A2, F7GEU6, G7N3K6
      Related
      ENSMMUP00000007333.2, ENSMMUT00000007806.4
      Conserved Domains (5) summary
      cd01800
      Location:718793
      SF3a120_C; Ubiquitin-like domain of Mammalian splicing factor SF3a_120
      smart00648
      Location:50103
      SWAP; Suppressor-of-White-APricot splicing regulator
      smart00213
      Location:718786
      UBQ; Ubiquitin homologues
      pfam01805
      Location:165215
      Surp; Surp module
      pfam12230
      Location:229471
      PRP21_like_P; Pre-mRNA splicing factor PRP21 like protein

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      21188825..21212279
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)