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    COL19A1 collagen type XIX alpha 1 chain [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 716948, updated on 17-Aug-2024

    Summary

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    Official Symbol
    COL19A1provided by VGNC
    Official Full Name
    collagen type XIX alpha 1 chainprovided by VGNC
    Primary source
    VGNC:VGNC:71294
    See related
    Ensembl:ENSMMUG00000005574
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See COL19A1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    53
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (102622603..102953126, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (68001418..68332364)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114677572 Neighboring gene collagen type IX alpha 1 chain Neighboring gene uncharacterized LOC114677573 Neighboring gene 60S ribosomal protein L37 pseudogene Neighboring gene uncharacterized LOC114677574 Neighboring gene LMBR1 domain containing 1 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene uncharacterized LOC106997987

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    collagen alpha-1(XIX) chain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      102622603..102953126 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028847452.1 → XP_028703285.1  collagen alpha-1(XIX) chain isoform X2

      Conserved Domains (2) summary
      pfam01391
      Location:338 → 398
      Collagen; Collagen triple helix repeat (20 copies)
      smart00210
      Location:99 → 279
      TSPN; Thrombospondin N-terminal -like domains

    2. XM_015136650.2 → XP_014992136.2  collagen alpha-1(XIX) chain isoform X1

      Conserved Domains (2) summary
      pfam01391
      Location:338 → 398
      Collagen; Collagen triple helix repeat (20 copies)
      smart00210
      Location:99 → 279
      TSPN; Thrombospondin N-terminal -like domains

    3. XM_015136651.2 → XP_014992137.2  collagen alpha-1(XIX) chain isoform X3

      UniProtKB/TrEMBL
      F7G843
      Related
      ENSMMUP00000007362.4, ENSMMUT00000007835.4
      Conserved Domains (2) summary
      pfam01391
      Location:292 → 352
      Collagen; Collagen triple helix repeat (20 copies)
      smart00210
      Location:53 → 233
      TSPN; Thrombospondin N-terminal -like domains

    4. XM_015136652.2 → XP_014992138.2  collagen alpha-1(XIX) chain isoform X4

      Conserved Domains (2) summary
      pfam01391
      Location:338 → 398
      Collagen; Collagen triple helix repeat (20 copies)
      smart00210
      Location:99 → 279
      TSPN; Thrombospondin N-terminal -like domains
    Nucleotide Protein
    Heading Accession and Version

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