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    BCAN brevican [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718545, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BCANprovided by VGNC
    Official Full Name
    brevicanprovided by VGNC
    Primary source
    VGNC:VGNC:70112
    See related
    Ensembl:ENSMMUG00000017093
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BCAN in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (94306554..94324515, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (131269105..131287068)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106992639 Neighboring gene nestin Neighboring gene uncharacterized LOC106992915 Neighboring gene hyaluronan and proteoglycan link protein 2 Neighboring gene G-patch domain containing 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hyaluronic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    brevican core protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      94306554..94324515 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015112247.2 → XP_014967733.2  brevican core protein isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZET1, F7HJ53
      Related
      ENSMMUP00000064120.1, ENSMMUT00000106529.1
      Conserved Domains (7) summary
      cd00033
      Location:814 → 871
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      PHA03247
      Location:353 → 653
      PHA03247; large tegument protein UL36; Provisional
      cd03517
      Location:157 → 251
      Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
      cd03520
      Location:258 → 353
      Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
      pfam00008
      Location:649 → 678
      EGF; EGF-like domain
      cl02432
      Location:687 → 810
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
      cl11960
      Location:49 → 158
      Ig; Immunoglobulin domain

    2. XM_001116679.4 → XP_001116679.2  brevican core protein isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZET1, H9FYA2
      Conserved Domains (7) summary
      cd00033
      Location:814 → 871
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      PHA03247
      Location:353 → 653
      PHA03247; large tegument protein UL36; Provisional
      cd03517
      Location:157 → 251
      Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
      cd03520
      Location:258 → 353
      Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
      pfam00008
      Location:649 → 678
      EGF; EGF-like domain
      cl02432
      Location:687 → 810
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
      cl11960
      Location:49 → 158
      Ig; Immunoglobulin domain

    3. XM_015112239.2 → XP_014967725.2  brevican core protein isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZET1, F7HJ53
      Related
      ENSMMUP00000022489.4, ENSMMUT00000024031.4
      Conserved Domains (7) summary
      cd00033
      Location:814 → 871
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      PHA03247
      Location:353 → 653
      PHA03247; large tegument protein UL36; Provisional
      cd03517
      Location:157 → 251
      Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
      cd03520
      Location:258 → 353
      Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
      pfam00008
      Location:649 → 678
      EGF; EGF-like domain
      cl02432
      Location:687 → 810
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
      cl11960
      Location:49 → 158
      Ig; Immunoglobulin domain

    4. XM_028827598.1 → XP_028683431.1  brevican core protein isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZET1, F7HJ53
      Conserved Domains (7) summary
      cd00033
      Location:814 → 871
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      PHA03247
      Location:353 → 653
      PHA03247; large tegument protein UL36; Provisional
      cd03517
      Location:157 → 251
      Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
      cd03520
      Location:258 → 353
      Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
      pfam00008
      Location:649 → 678
      EGF; EGF-like domain
      cl02432
      Location:687 → 810
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
      cl11960
      Location:49 → 158
      Ig; Immunoglobulin domain

    5. XM_028827609.1 → XP_028683442.1  brevican core protein isoform X3

      UniProtKB/TrEMBL
      H9FYA4, I2CYT0
      Conserved Domains (4) summary
      PHA03247
      Location:353 → 631
      PHA03247; large tegument protein UL36; Provisional
      cd03517
      Location:157 → 251
      Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
      cd03520
      Location:258 → 353
      Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
      cl11960
      Location:49 → 158
      Ig; Immunoglobulin domain

    RNA

    1. XR_003719831.1 RNA Sequence

    2. XR_003719830.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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