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    ATG101 autophagy related 101 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 696954, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ATG101provided by VGNC
    Official Full Name
    autophagy related 101provided by VGNC
    Primary source
    VGNC:VGNC:70132
    Locus tag
    EGK_03666
    See related
    Ensembl:ENSMMUG00000015392
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    C12orf44; C11H12orf44
    Orthologs
    human mouse all
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    Genomic context

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    See ATG101 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (51677986..51686196)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (50752598..50760521)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene vegetative cell wall protein gp1-like Neighboring gene uncharacterized LOC114670851 Neighboring gene nuclear receptor subfamily 4 group A member 1 Neighboring gene small integral membrane protein 41 Neighboring gene keratin 80

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in autophagosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in autophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    autophagy-related protein 101

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193916.2 → NP_001180845.1  autophagy-related protein 101

      See identical proteins and their annotated locations for NP_001180845.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000060
      UniProtKB/TrEMBL
      A0A8J8XXG0, F7HI77, G7N711
      Related
      ENSMMUP00000076130.1, ENSMMUT00000102642.1
      Conserved Domains (1) summary
      pfam07855
      Location:9 → 172
      ATG101; Autophagy-related protein 101

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      51677986..51686196
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028828818.1 → XP_028684651.1  autophagy-related protein 101 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XXG0, F7HI77, G7N711
      Related
      ENSMMUP00000077843.1, ENSMMUT00000091974.1
      Conserved Domains (1) summary
      pfam07855
      Location:9 → 172
      ATG101; Autophagy-related protein 101

    2. XM_028828816.1 → XP_028684649.1  autophagy-related protein 101 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XXG0, F7HI77, G7N711
      Related
      ENSMMUP00000039635.1, ENSMMUT00000046599.3
      Conserved Domains (1) summary
      pfam07855
      Location:9 → 172
      ATG101; Autophagy-related protein 101

    3. XM_001091708.4 → XP_001091708.1  autophagy-related protein 101 isoform X1

      See identical proteins and their annotated locations for XP_001091708.1

      UniProtKB/TrEMBL
      A0A8J8XXG0, F7HI77, G7N711
      Related
      ENSMMUP00000069034.1, ENSMMUT00000086509.1
      Conserved Domains (1) summary
      pfam07855
      Location:9 → 172
      ATG101; Autophagy-related protein 101

    4. XM_028828817.1 → XP_028684650.1  autophagy-related protein 101 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XXG0, F7HI77, G7N711
      Conserved Domains (1) summary
      pfam07855
      Location:9 → 172
      ATG101; Autophagy-related protein 101
    Nucleotide Protein
    Heading Accession and Version

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